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AT5G52580


Description : RabGAP/TBC domain-containing protein


Gene families : OG0004328 (Archaeplastida) Phylogenetic Tree(s): OG0004328_tree ,
OG_05_0005697 (LandPlants) Phylogenetic Tree(s): OG_05_0005697_tree ,
OG_06_0007337 (SeedPlants) Phylogenetic Tree(s): OG_06_0007337_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52580
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Solyc07g008000.4.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0004661 protein geranylgeranyltransferase activity IEP Neighborhood
MF GO:0004662 CAAX-protein geranylgeranyltransferase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005953 CAAX-protein geranylgeranyltransferase complex IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0008154 actin polymerization or depolymerization IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
MF GO:0008318 protein prenyltransferase activity IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009968 negative regulation of signal transduction IEP Neighborhood
BP GO:0010029 regulation of seed germination IEP Neighborhood
CC GO:0010287 plastoglobule IEP Neighborhood
BP GO:0010351 lithium ion transport IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0010648 negative regulation of cell communication IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0018342 protein prenylation IEP Neighborhood
BP GO:0018344 protein geranylgeranylation IEP Neighborhood
BP GO:0023057 negative regulation of signaling IEP Neighborhood
BP GO:0030041 actin filament polymerization IEP Neighborhood
CC GO:0031209 SCAR complex IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032182 ubiquitin-like protein binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0043130 ubiquitin binding IEP Neighborhood
BP GO:0045787 positive regulation of cell cycle IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045926 negative regulation of growth IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046620 regulation of organ growth IEP Neighborhood
BP GO:0046621 negative regulation of organ growth IEP Neighborhood
MF GO:0046982 protein heterodimerization activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048317 seed morphogenesis IEP Neighborhood
BP GO:0048482 plant ovule morphogenesis IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048640 negative regulation of developmental growth IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0051125 regulation of actin nucleation IEP Neighborhood
BP GO:0051127 positive regulation of actin nucleation IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0051302 regulation of cell division IEP Neighborhood
BP GO:0051445 regulation of meiotic cell cycle IEP Neighborhood
BP GO:0051446 positive regulation of meiotic cell cycle IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
BP GO:0097354 prenylation IEP Neighborhood
BP GO:1900140 regulation of seedling development IEP Neighborhood
BP GO:1901419 regulation of response to alcohol IEP Neighborhood
BP GO:1901420 negative regulation of response to alcohol IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1905957 regulation of cellular response to alcohol IEP Neighborhood
BP GO:1905958 negative regulation of cellular response to alcohol IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
BP GO:2000243 positive regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 378 606
IPR021935 DUF3548 99 188
No external refs found!