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  5. AT5G53905

AT5G53905


Description : unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1278 (InterPro:IPR010701); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54062.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0001959 (Archaeplastida) Phylogenetic Tree(s): OG0001959_tree ,
OG_05_0001278 (LandPlants) Phylogenetic Tree(s): OG_05_0001278_tree ,
OG_06_0000661 (SeedPlants) Phylogenetic Tree(s): OG_06_0000661_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53905
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT5G48210 No alias Protein of unknown function (DUF1278) 0.03 Archaeplastida
Solyc12g009850.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004311 farnesyltranstransferase activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004565 beta-galactosidase activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
BP GO:0006743 ubiquinone metabolic process IEP Neighborhood
BP GO:0006744 ubiquinone biosynthetic process IEP Neighborhood
BP GO:0007043 cell-cell junction assembly IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008422 beta-glucosidase activity IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
MF GO:0015925 galactosidase activity IEP Neighborhood
MF GO:0015926 glucosidase activity IEP Neighborhood
BP GO:0016093 polyprenol metabolic process IEP Neighborhood
BP GO:0016094 polyprenol biosynthetic process IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019137 thioglucosidase activity IEP Neighborhood
BP GO:0019348 dolichol metabolic process IEP Neighborhood
BP GO:0019408 dolichol biosynthetic process IEP Neighborhood
BP GO:0034329 cell junction assembly IEP Neighborhood
BP GO:0034330 cell junction organization IEP Neighborhood
CC GO:0044426 cell wall part IEP Neighborhood
CC GO:0044462 external encapsulating structure part IEP Neighborhood
BP GO:0045216 cell-cell junction organization IEP Neighborhood
MF GO:0045547 dehydrodolichyl diphosphate synthase activity IEP Neighborhood
CC GO:0048226 Casparian strip IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0048829 root cap development IEP Neighborhood
MF GO:1990135 flavonoid sulfotransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR008502 Prolamin-like 27 83
No external refs found!