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  5. MA_5170g0020

MA_5170g0020


Description : no hits & (original description: none)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0000116 (SeedPlants) Phylogenetic Tree(s): OG_06_0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_5170g0020
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AT3G18773 No alias RING/U-box superfamily protein 0.02 Archaeplastida
GSVIVT01022306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_129306g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_13397g0010 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_15116g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_1623327g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_167410g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_2159g0010 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_289646g0010 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.04 Archaeplastida
MA_347868g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_43248g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6828g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_69343g0010 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
MA_71146g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_711804g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7206g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_895676g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Smo441685 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Zm00001e032838_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 87 129
No external refs found!