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AT5G54200


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0000619 (Archaeplastida) Phylogenetic Tree(s): OG0000619_tree ,
OG_05_0000400 (LandPlants) Phylogenetic Tree(s): OG_05_0000400_tree ,
OG_06_0000268 (SeedPlants) Phylogenetic Tree(s): OG_06_0000268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G54200
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00175p00024710 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.02 Archaeplastida
GSVIVT01026540001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.05 Archaeplastida
Mp7g16950.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.02 Archaeplastida
Smo427312 No alias No description available 0.09 Archaeplastida
Solyc10g086430.3.1 No alias COMPASS-like H3K4 histone methylase component WDR5B... 0.02 Archaeplastida
Solyc11g005710.2.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.04 Archaeplastida
Zm00001e039506_P002 No alias COMPASS-like H3K4 histone methylase component WDR5B... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005834 heterotrimeric G-protein complex ISS Interproscan
BP GO:0007165 signal transduction ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009292 genetic transfer IEP Neighborhood
BP GO:0009294 DNA mediated transformation IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
CC GO:0009504 cell plate IEP Neighborhood
CC GO:0009524 phragmoplast IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0010093 specification of floral organ identity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0019953 sexual reproduction IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044703 multi-organism reproductive process IEP Neighborhood
BP GO:0044764 multi-organism cellular process IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0090701 specification of plant organ identity IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 500 537
IPR001680 WD40_repeat 358 391
IPR001680 WD40_repeat 459 495
IPR001680 WD40_repeat 635 672
No external refs found!