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  5. AT5G54340

AT5G54340


Description : C2H2 and C2HC zinc fingers superfamily protein


Gene families : OG0020938 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0017390 (LandPlants) Phylogenetic Tree(s): OG_05_0017390_tree ,
OG_06_0016920 (SeedPlants) Phylogenetic Tree(s): OG_06_0016920_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G54340
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AT5G54350 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0009299 mRNA transcription IEP Neighborhood
CC GO:0031350 intrinsic component of plastid membrane IEP Neighborhood
CC GO:0031351 integral component of plastid membrane IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0045309 protein phosphorylated amino acid binding IEP Neighborhood
MF GO:0051219 phosphoprotein binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!