- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Late embryogenesis abundant (LEA) protein-related
Gene families : OG0000287 (Archaeplastida) Phylogenetic Tree(s): OG0000287_tree ,
OG_05_0000195 (LandPlants) Phylogenetic Tree(s): OG_05_0000195_tree ,
OG_06_0001887 (SeedPlants) Phylogenetic Tree(s): OG_06_0001887_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G54370 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00178790 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida | |
| AMTR_s00040p00170390 | evm_27.TU.AmTr_v1... | No description available | 0.03 | Archaeplastida | |
| AMTR_s00171p00044550 | evm_27.TU.AmTr_v1... | No description available | 0.04 | Archaeplastida | |
| GSVIVT01005843001 | No alias | No description available | 0.03 | Archaeplastida | |
| GSVIVT01005845001 | No alias | No description available | 0.05 | Archaeplastida | |
| GSVIVT01034762001 | No alias | No description available | 0.03 | Archaeplastida | |
| Gb_08582 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Gb_15126 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Gb_38738 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| LOC_Os01g73700.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| LOC_Os01g73710.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| LOC_Os01g73720.1 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| LOC_Os01g73730.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| LOC_Os05g01680.1 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| LOC_Os05g47940.1 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| LOC_Os11g05360.1 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| MA_10434352g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_558137g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_6494080g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_6640022g0010 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| MA_6771381g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| MA_74876g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_7605738g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_8955g0010 | No alias | no hits & (original description: none) | 0.08 | Archaeplastida | |
| MA_957739g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Mp1g03490.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Mp7g08760.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Mpzg00310.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Pp3c20_18650V3.1 | No alias | Late embryogenesis abundant (LEA) protein-related | 0.05 | Archaeplastida | |
| Pp3c23_2500V3.1 | No alias | Late embryogenesis abundant (LEA) protein-related | 0.02 | Archaeplastida | |
| Pp3c23_2628V3.1 | No alias | No annotation | 0.03 | Archaeplastida | |
| Pp3s49_30V3.1 | No alias | Late embryogenesis abundant (LEA) protein-related | 0.04 | Archaeplastida | |
| Solyc01g107710.2.1 | No alias | no hits & (original description: none) | 0.11 | Archaeplastida | |
| Solyc01g107720.3.1 | No alias | no hits & (original description: none) | 0.11 | Archaeplastida | |
| Solyc02g078930.3.1 | No alias | no hits & (original description: none) | 0.08 | Archaeplastida | |
| Solyc06g034130.2.1 | No alias | no hits & (original description: none) | 0.12 | Archaeplastida | |
| Solyc11g069280.2.1 | No alias | no hits & (original description: none) | 0.11 | Archaeplastida | |
| Solyc11g073140.2.1 | No alias | no hits & (original description: none) | 0.11 | Archaeplastida | |
| Solyc11g073150.1.1 | No alias | no hits & (original description: none) | 0.12 | Archaeplastida | |
| Zm00001e002062_P001 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| Zm00001e008224_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e018525_P001 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| Zm00001e018526_P001 | No alias | no hits & (original description: none) | 0.09 | Archaeplastida | |
| Zm00001e018527_P001 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| Zm00001e021386_P001 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| Zm00001e024129_P001 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| Zm00001e028269_P001 | No alias | no hits & (original description: none) | 0.09 | Archaeplastida | |
| Zm00001e029686_P001 | No alias | no hits & (original description: none) | 0.08 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005576 | extracellular region | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Neighborhood |
| MF | GO:0004311 | farnesyltranstransferase activity | IEP | Neighborhood |
| MF | GO:0004372 | glycine hydroxymethyltransferase activity | IEP | Neighborhood |
| MF | GO:0004536 | deoxyribonuclease activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004568 | chitinase activity | IEP | Neighborhood |
| MF | GO:0004659 | prenyltransferase activity | IEP | Neighborhood |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Neighborhood |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Neighborhood |
| BP | GO:0005513 | detection of calcium ion | IEP | Neighborhood |
| BP | GO:0006563 | L-serine metabolic process | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006812 | cation transport | IEP | Neighborhood |
| BP | GO:0006826 | iron ion transport | IEP | Neighborhood |
| MF | GO:0008417 | fucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0008422 | beta-glucosidase activity | IEP | Neighborhood |
| MF | GO:0008446 | GDP-mannose 4,6-dehydratase activity | IEP | Neighborhood |
| BP | GO:0009267 | cellular response to starvation | IEP | Neighborhood |
| BP | GO:0009733 | response to auxin | IEP | Neighborhood |
| MF | GO:0009815 | 1-aminocyclopropane-1-carboxylate oxidase activity | IEP | Neighborhood |
| BP | GO:0009832 | plant-type cell wall biogenesis | IEP | Neighborhood |
| BP | GO:0009834 | plant-type secondary cell wall biogenesis | IEP | Neighborhood |
| BP | GO:0009913 | epidermal cell differentiation | IEP | Neighborhood |
| BP | GO:0009991 | response to extracellular stimulus | IEP | Neighborhood |
| BP | GO:0010106 | cellular response to iron ion starvation | IEP | Neighborhood |
| BP | GO:0010167 | response to nitrate | IEP | Neighborhood |
| BP | GO:0010306 | rhamnogalacturonan II biosynthetic process | IEP | Neighborhood |
| BP | GO:0010396 | rhamnogalacturonan II metabolic process | IEP | Neighborhood |
| BP | GO:0010453 | regulation of cell fate commitment | IEP | Neighborhood |
| BP | GO:0010455 | positive regulation of cell fate commitment | IEP | Neighborhood |
| BP | GO:0015698 | inorganic anion transport | IEP | Neighborhood |
| BP | GO:0015706 | nitrate transport | IEP | Neighborhood |
| MF | GO:0015926 | glucosidase activity | IEP | Neighborhood |
| BP | GO:0016094 | polyprenol biosynthetic process | IEP | Neighborhood |
| BP | GO:0016128 | phytosteroid metabolic process | IEP | Neighborhood |
| BP | GO:0016129 | phytosteroid biosynthetic process | IEP | Neighborhood |
| BP | GO:0016131 | brassinosteroid metabolic process | IEP | Neighborhood |
| BP | GO:0016132 | brassinosteroid biosynthetic process | IEP | Neighborhood |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Neighborhood |
| MF | GO:0019137 | thioglucosidase activity | IEP | Neighborhood |
| BP | GO:0019348 | dolichol metabolic process | IEP | Neighborhood |
| BP | GO:0019408 | dolichol biosynthetic process | IEP | Neighborhood |
| MF | GO:0019825 | oxygen binding | IEP | Neighborhood |
| BP | GO:0030001 | metal ion transport | IEP | Neighborhood |
| MF | GO:0030234 | enzyme regulator activity | IEP | Neighborhood |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | Neighborhood |
| MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
| BP | GO:0030855 | epithelial cell differentiation | IEP | Neighborhood |
| BP | GO:0031667 | response to nutrient levels | IEP | Neighborhood |
| BP | GO:0031668 | cellular response to extracellular stimulus | IEP | Neighborhood |
| BP | GO:0031669 | cellular response to nutrient levels | IEP | Neighborhood |
| MF | GO:0035252 | UDP-xylosyltransferase activity | IEP | Neighborhood |
| MF | GO:0042285 | xylosyltransferase activity | IEP | Neighborhood |
| BP | GO:0042546 | cell wall biogenesis | IEP | Neighborhood |
| BP | GO:0042594 | response to starvation | IEP | Neighborhood |
| BP | GO:0045165 | cell fate commitment | IEP | Neighborhood |
| MF | GO:0045547 | dehydrodolichyl diphosphate synthase activity | IEP | Neighborhood |
| BP | GO:0045597 | positive regulation of cell differentiation | IEP | Neighborhood |
| MF | GO:0046910 | pectinesterase inhibitor activity | IEP | Neighborhood |
| BP | GO:0048829 | root cap development | IEP | Neighborhood |
| BP | GO:0051592 | response to calcium ion | IEP | Neighborhood |
| BP | GO:0052325 | cell wall pectin biosynthetic process | IEP | Neighborhood |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
| MF | GO:0061134 | peptidase regulator activity | IEP | Neighborhood |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | Neighborhood |
| BP | GO:0071496 | cellular response to external stimulus | IEP | Neighborhood |
| MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009646 | Root_cap | 246 | 302 |
| No external refs found! |