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Description : transcription factor (ARF)
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0009308 (LandPlants) Phylogenetic Tree(s): OG_05_0009308_tree ,
OG_06_0012392 (SeedPlants) Phylogenetic Tree(s): OG_06_0012392_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_55076g0010 | |
| Cluster | HCCA: Cluster_254 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00267580 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
| AMTR_s00148p00046020 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.07 | Archaeplastida | |
| AT1G19220 | ARF19, IAA22, ARF11 | auxin response factor 19 | 0.03 | Archaeplastida | |
| GSVIVT01004942001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
| GSVIVT01037136001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.04 | Archaeplastida | |
| Gb_32864 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
| Gb_33804 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
| LOC_Os02g06910.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
| Pp3c14_16990V3.1 | No alias | auxin response factor 6 | 0.05 | Archaeplastida | |
| Pp3c16_6100V3.1 | No alias | auxin response factor 1 | 0.02 | Archaeplastida | |
| Pp3c1_14480V3.1 | No alias | auxin response factor 6 | 0.02 | Archaeplastida | |
| Solyc12g042070.3.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Zm00001e003591_P003 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Zm00001e016366_P002 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Zm00001e025163_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
| Zm00001e028396_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000776 | kinetochore | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006812 | cation transport | IEP | Neighborhood |
| BP | GO:0006813 | potassium ion transport | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
| BP | GO:0009725 | response to hormone | IEP | Neighborhood |
| BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015672 | monovalent inorganic cation transport | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0030001 | metal ion transport | IEP | Neighborhood |
| BP | GO:0034220 | ion transmembrane transport | IEP | Neighborhood |
| BP | GO:0034508 | centromere complex assembly | IEP | Neighborhood |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
| BP | GO:0071804 | cellular potassium ion transport | IEP | Neighborhood |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Neighborhood |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
| BP | GO:0098655 | cation transmembrane transport | IEP | Neighborhood |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Neighborhood |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR033389 | AUX/IAA_dom | 417 | 506 |
| No external refs found! |