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  5. AT5G56190

AT5G56190


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0001171 (Archaeplastida) Phylogenetic Tree(s): OG0001171_tree ,
OG_05_0001325 (LandPlants) Phylogenetic Tree(s): OG_05_0001325_tree ,
OG_06_0001016 (SeedPlants) Phylogenetic Tree(s): OG_06_0001016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G56190
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00064900 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
LOC_Os03g26870.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g31560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e004207_P002 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e031051_P005 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005834 heterotrimeric G-protein complex ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000266 mitochondrial fission IEP Neighborhood
CC GO:0000502 proteasome complex IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0007005 mitochondrion organization IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008154 actin polymerization or depolymerization IEP Neighborhood
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
CC GO:0009524 phragmoplast IEP Neighborhood
BP GO:0009734 auxin-activated signaling pathway IEP Neighborhood
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009880 embryonic pattern specification IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009910 negative regulation of flower development IEP Neighborhood
BP GO:0009911 positive regulation of flower development IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0010072 primary shoot apical meristem specification IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
BP GO:0010305 leaf vascular tissue pattern formation IEP Neighborhood
BP GO:0010363 regulation of plant-type hypersensitive response IEP Neighborhood
BP GO:0010431 seed maturation IEP Neighborhood
BP GO:0010941 regulation of cell death IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0030041 actin filament polymerization IEP Neighborhood
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP Neighborhood
BP GO:0031348 negative regulation of defense response IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034243 regulation of transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034976 response to endoplasmic reticulum stress IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043067 regulation of programmed cell death IEP Neighborhood
BP GO:0043069 negative regulation of programmed cell death IEP Neighborhood
BP GO:0043401 steroid hormone mediated signaling pathway IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048317 seed morphogenesis IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0060548 negative regulation of cell death IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090421 embryonic meristem initiation IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
BP GO:2000242 negative regulation of reproductive process IEP Neighborhood
BP GO:2000243 positive regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 303 341
No external refs found!