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  5. MA_5937864g0010

MA_5937864g0010


Description : Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana (sp|q9skz2|caf1g_arath : 171.0)


Gene families : OG0000981 (Archaeplastida) Phylogenetic Tree(s): OG0000981_tree ,
OG_05_0001237 (LandPlants) Phylogenetic Tree(s): OG_05_0001237_tree ,
OG_06_0001421 (SeedPlants) Phylogenetic Tree(s): OG_06_0001421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_5937864g0010
Cluster HCCA: Cluster_348

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00236350 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.07 Archaeplastida
AT3G44260 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.05 Archaeplastida
AT5G22250 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.05 Archaeplastida
GSVIVT01035897001 No alias Probable CCR4-associated factor 1 homolog 10... 0.03 Archaeplastida
Gb_19103 No alias deadenylase component CAF1 of CCR4-NOT complex 0.05 Archaeplastida
LOC_Os04g58810.1 No alias Probable CCR4-associated factor 1 homolog 11... 0.07 Archaeplastida
LOC_Os09g24990.2 No alias Probable CCR4-associated factor 1 homolog 7... 0.03 Archaeplastida
Mp8g01530.1 No alias Probable CCR4-associated factor 1 homolog 6... 0.02 Archaeplastida
Pp3c21_18060V3.1 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.03 Archaeplastida
Solyc06g074030.1.1 No alias deadenylase component CAF1 of CCR4-NOT complex 0.08 Archaeplastida
Solyc11g045130.2.1 No alias Probable CCR4-associated factor 1 homolog 7... 0.05 Archaeplastida
Solyc11g068770.1.1 No alias deadenylase component CAF1 of CCR4-NOT complex 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006941 RNase_CAF1 48 94
No external refs found!