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  5. AT5G56700

AT5G56700


Description : FBD / Leucine Rich Repeat domains containing protein


Gene families : OG0001094 (Archaeplastida) Phylogenetic Tree(s): OG0001094_tree ,
OG_05_0000663 (LandPlants) Phylogenetic Tree(s): OG_05_0000663_tree ,
OG_06_0000324 (SeedPlants) Phylogenetic Tree(s): OG_06_0000324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G56700
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G19410 No alias FBD / Leucine Rich Repeat domains containing protein 0.01 Archaeplastida
AT1G26815 No alias FBD domain family 0.03 Archaeplastida
AT1G32375 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT1G50980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT1G55030 No alias RNI-like superfamily protein 0.03 Archaeplastida
AT3G49030 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.06 Archaeplastida
AT3G49040 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT4G00315 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT4G13965 No alias Protein with RNI-like/FBD-like domains 0.02 Archaeplastida
AT4G15075 No alias FBD-like domain family protein 0.04 Archaeplastida
AT4G26340 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT4G26350 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT5G38570 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G38590 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 Archaeplastida
AT5G40750 No alias FBD / Leucine Rich Repeat domains containing protein 0.04 Archaeplastida
AT5G52460 EDA41 FBD, F-box and Leucine Rich Repeat domains containing protein 0.03 Archaeplastida
AT5G56370 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 Archaeplastida
AT5G56390 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT5G56400 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.04 Archaeplastida
AT5G56430 No alias F-box/FBD-like domains containing protein 0.04 Archaeplastida
AT5G56452 No alias FBD-like domain family protein 0.03 Archaeplastida
AT5G56560 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.03 Archaeplastida
AT5G56570 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT5G56820 No alias F-box/RNI-like/FBD-like domains-containing protein 0.01 Archaeplastida
AT5G60610 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT5G62970 No alias Protein with RNI-like/FBD-like domains 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000706 meiotic DNA double-strand break processing IEP Neighborhood
BP GO:0000729 DNA double-strand break processing IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity IEP Neighborhood
MF GO:0004108 citrate (Si)-synthase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006011 UDP-glucose metabolic process IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006266 DNA ligation IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006312 mitotic recombination IEP Neighborhood
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007129 synapsis IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0010491 UTP:arabinose-1-phosphate uridylyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017103 UTP:galactose-1-phosphate uridylyltransferase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033356 UDP-L-arabinose metabolic process IEP Neighborhood
BP GO:0034086 maintenance of sister chromatid cohesion IEP Neighborhood
BP GO:0034090 maintenance of meiotic sister chromatid cohesion IEP Neighborhood
MF GO:0036440 citrate synthase activity IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
CC GO:0042645 mitochondrial nucleoid IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0046398 UDP-glucuronate metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0047268 galactinol-raffinose galactosyltransferase activity IEP Neighborhood
MF GO:0047338 UTP:xylose-1-phosphate uridylyltransferase activity IEP Neighborhood
MF GO:0047350 glucuronate-1-phosphate uridylyltransferase activity IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
BP GO:0051131 chaperone-mediated protein complex assembly IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0051748 UTP-monosaccharide-1-phosphate uridylyltransferase activity IEP Neighborhood
BP GO:0052573 UDP-D-galactose metabolic process IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0061982 meiosis I cell cycle process IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
BP GO:0070407 oxidation-dependent protein catabolic process IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0080188 RNA-directed DNA methylation IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 29
IPR013101 Leu-rich_rpt_2 112 137
IPR006566 FBD 307 348
No external refs found!