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  5. MA_61973g0010

MA_61973g0010


Description : Flowering time control protein FPA OS=Arabidopsis thaliana (sp|q8lpq9|fpa_arath : 164.0)


Gene families : OG0003475 (Archaeplastida) Phylogenetic Tree(s): OG0003475_tree ,
OG_05_0009680 (LandPlants) Phylogenetic Tree(s): OG_05_0009680_tree ,
OG_06_0010450 (SeedPlants) Phylogenetic Tree(s): OG_06_0010450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_61973g0010
Cluster HCCA: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00188130 evm_27.TU.AmTr_v1... Flowering time control protein FPA OS=Arabidopsis thaliana 0.03 Archaeplastida
AT4G12640 No alias RNA recognition motif (RRM)-containing protein 0.04 Archaeplastida
GSVIVT01010842001 No alias Flowering time control protein FPA OS=Arabidopsis thaliana 0.11 Archaeplastida
Gb_01786 No alias Flowering time control protein FPA OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os09g12730.1 No alias Flowering time control protein FPA OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os09g34070.1 No alias Flowering time control protein FPA OS=Arabidopsis... 0.04 Archaeplastida
Mp4g06830.1 No alias Flowering time control protein FPA OS=Arabidopsis... 0.05 Archaeplastida
Pp3c11_21890V3.1 No alias RNA binding 0.11 Archaeplastida
Pp3c7_3950V3.1 No alias RNA binding 0.1 Archaeplastida
Solyc06g053320.4.1 No alias Flowering time control protein FPA OS=Arabidopsis... 0.05 Archaeplastida
Solyc12g011050.2.1 No alias Flowering time control protein FPA OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e034721_P001 No alias Flowering time control protein FPA OS=Arabidopsis... 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR012921 SPOC_C 387 502
IPR000504 RRM_dom 80 132
No external refs found!