MA_63122g0010

Description : Polygalacturonase OS=Actinidia deliciosa (sp|p35336|pglr_actde : 246.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 169.4)

Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0000273 (LandPlants) Phylogenetic Tree(s): OG_05_0000273_tree ,
OG_06_0000208 (SeedPlants) Phylogenetic Tree(s): OG_06_0000208_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_63122g0010
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00066p00135670	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.02	Archaeplastida
AT1G02460	No alias	Pectin lyase-like superfamily protein	0.03	Archaeplastida
AT1G23460	No alias	Pectin lyase-like superfamily protein	0.02	Archaeplastida
AT1G56710	No alias	Pectin lyase-like superfamily protein	0.03	Archaeplastida
AT3G57510	ADPG1	Pectin lyase-like superfamily protein	0.03	Archaeplastida
GSVIVT01004007001	No alias	Polygalacturonase OS=Prunus persica	0.03	Archaeplastida
GSVIVT01031298001	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01032117001	No alias	Cell wall.pectin.modification and...	0.02	Archaeplastida
GSVIVT01032447001	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01033364001	No alias	Cell wall.pectin.modification and...	0.03	Archaeplastida
LOC_Os01g66710.1	No alias	Polygalacturonase OS=Prunus persica...	0.03	Archaeplastida
Mp3g10720.1	No alias	Polygalacturonase OS=Chamaecyparis obtusa...	0.03	Archaeplastida
Smo111266	No alias	Polygalacturonase OS=Chamaecyparis obtusa	0.02	Archaeplastida
Smo78038	No alias	Cell wall.pectin.modification and...	0.02	Archaeplastida
Solyc02g067630.3.1	No alias	Polygalacturonase OS=Prunus persica...	0.03	Archaeplastida
Solyc02g067640.3.1	No alias	Polygalacturonase OS=Prunus persica...	0.02	Archaeplastida
Solyc08g014540.1.1	No alias	Polygalacturonase OS=Prunus persica...	0.03	Archaeplastida
Solyc08g014560.3.1	No alias	Polygalacturonase OS=Prunus persica...	0.04	Archaeplastida
Solyc12g019120.2.1	No alias	Polygalacturonase OS=Prunus persica...	0.03	Archaeplastida
Solyc12g019140.3.1	No alias	Polygalacturonase OS=Prunus persica...	0.03	Archaeplastida
Solyc12g019230.2.1	No alias	Polygalacturonase OS=Prunus persica...	0.03	Archaeplastida
Solyc12g096740.1.1	No alias	Polygalacturonase OS=Prunus persica...	0.03	Archaeplastida
Zm00001e019002_P001	No alias	Polygalacturonase OS=Prunus persica...	0.03	Archaeplastida
Zm00001e032294_P001	No alias	Probable polygalacturonase At1g80170 OS=Arabidopsis...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005730	nucleolus	IEP	Neighborhood
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Neighborhood
BP	GO:0006817	phosphate ion transport	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
CC	GO:0030677	ribonuclease P complex	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
CC	GO:1902555	endoribonuclease complex	IEP	Neighborhood
CC	GO:1905348	endonuclease complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	87	165
IPR000743	Glyco_hydro_28	170	334

External Links

No external refs found!

MA_63122g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation