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  5. AT5G57780

AT5G57780


Description : EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0005074 (Archaeplastida) Phylogenetic Tree(s): OG0005074_tree ,
OG_05_0003475 (LandPlants) Phylogenetic Tree(s): OG_05_0003475_tree ,
OG_06_0001029 (SeedPlants) Phylogenetic Tree(s): OG_06_0001029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G57780
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00143370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
LOC_Os02g08220.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os06g44320.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os08g16030.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc07g006310.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP Neighborhood
MF GO:0004029 aldehyde dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004165 dodecenoyl-CoA delta-isomerase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
CC GO:0008180 COP9 signalosome IEP Neighborhood
BP GO:0008361 regulation of cell size IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0008809 carnitine racemase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009641 shade avoidance IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0010015 root morphogenesis IEP Neighborhood
BP GO:0010025 wax biosynthetic process IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010082 regulation of root meristem growth IEP Neighborhood
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP Neighborhood
BP GO:0010143 cutin biosynthetic process IEP Neighborhood
BP GO:0010166 wax metabolic process IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010337 regulation of salicylic acid metabolic process IEP Neighborhood
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP Neighborhood
BP GO:0010540 basipetal auxin transport IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010565 regulation of cellular ketone metabolic process IEP Neighborhood
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0010893 positive regulation of steroid biosynthetic process IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
BP GO:0010942 positive regulation of cell death IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019216 regulation of lipid metabolic process IEP Neighborhood
BP GO:0019217 regulation of fatty acid metabolic process IEP Neighborhood
BP GO:0019218 regulation of steroid metabolic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019747 regulation of isoprenoid metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032350 regulation of hormone metabolic process IEP Neighborhood
BP GO:0032352 positive regulation of hormone metabolic process IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0032881 regulation of polysaccharide metabolic process IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042304 regulation of fatty acid biosynthetic process IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
MF GO:0043621 protein self-association IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
BP GO:0045834 positive regulation of lipid metabolic process IEP Neighborhood
BP GO:0045940 positive regulation of steroid metabolic process IEP Neighborhood
BP GO:0046885 regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0046886 positive regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0046889 positive regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0046890 regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050810 regulation of steroid biosynthetic process IEP Neighborhood
BP GO:0050829 defense response to Gram-negative bacterium IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
BP GO:0062012 regulation of small molecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080140 regulation of jasmonic acid metabolic process IEP Neighborhood
BP GO:0080141 regulation of jasmonic acid biosynthetic process IEP Neighborhood
BP GO:0080142 regulation of salicylic acid biosynthetic process IEP Neighborhood
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
MF GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901568 fatty acid derivative metabolic process IEP Neighborhood
BP GO:1901570 fatty acid derivative biosynthetic process IEP Neighborhood
BP GO:1902446 regulation of shade avoidance IEP Neighborhood
BP GO:1902448 positive regulation of shade avoidance IEP Neighborhood
BP GO:1902930 regulation of alcohol biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000488 positive regulation of brassinosteroid biosynthetic process IEP Neighborhood
BP GO:2000904 regulation of starch metabolic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!