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  5. MA_646g0010

MA_646g0010


Description : no hits & (original description: none)


Gene families : OG0003972 (Archaeplastida) Phylogenetic Tree(s): OG0003972_tree ,
OG_05_0003047 (LandPlants) Phylogenetic Tree(s): OG_05_0003047_tree ,
OG_06_0003288 (SeedPlants) Phylogenetic Tree(s): OG_06_0003288_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_646g0010
Cluster HCCA: Cluster_491

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00166420 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.08 Archaeplastida
AT4G39420 No alias unknown protein; Has 46 Blast hits to 40 proteins in 10... 0.12 Archaeplastida
GSVIVT01022255001 No alias No description available 0.1 Archaeplastida
GSVIVT01022256001 No alias No description available 0.13 Archaeplastida
GSVIVT01022257001 No alias No description available 0.12 Archaeplastida
Gb_30364 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g08750.2 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_25504g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
Mp4g01220.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Pp3c10_13600V3.1 No alias No annotation 0.07 Archaeplastida
Pp3c3_30110V3.1 No alias No annotation 0.13 Archaeplastida
Pp3c7_14700V3.1 No alias No annotation 0.07 Archaeplastida
Smo92664 No alias No description available 0.03 Archaeplastida
Solyc04g051570.4.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e006162_P003 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR028107 Spatacsin_C_dom 777 911
No external refs found!