AT5G58170 (SVL5)

Aliases : SVL5

Description : SHV3-like 5

Gene families : OG0001385 (Archaeplastida) Phylogenetic Tree(s): OG0001385_tree ,
OG_05_0000896 (LandPlants) Phylogenetic Tree(s): OG_05_0000896_tree ,
OG_06_0001220 (SeedPlants) Phylogenetic Tree(s): OG_06_0001220_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G58170
Cluster	HCCA: Cluster_155

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00055p00174750	evm_27.TU.AmTr_v1...	Glycerophosphodiester phosphodiesterase GDPDL3...	0.03	Archaeplastida
AMTR_s00252p00015420	evm_27.TU.AmTr_v1...	Glycerophosphodiester phosphodiesterase GDPDL6...	0.13	Archaeplastida
AT3G20520	SVL3	SHV3-like 3	0.03	Archaeplastida
AT4G26690	GPDL2, SHV3, MRH5	PLC-like phosphodiesterase family protein	0.08	Archaeplastida
GSVIVT01003731001	No alias	Glycerophosphodiester phosphodiesterase GDPDL6...	0.08	Archaeplastida
Gb_10598	No alias	Glycerophosphodiester phosphodiesterase GDPDL4...	0.04	Archaeplastida
LOC_Os02g09450.1	No alias	Glycerophosphodiester phosphodiesterase GDPDL7...	0.08	Archaeplastida
LOC_Os09g17000.1	No alias	Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4...	0.02	Archaeplastida
MA_10434415g0020	No alias	Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4...	0.03	Archaeplastida
Mp8g07940.1	No alias	Glycerophosphodiester phosphodiesterase GDPDL7...	0.05	Archaeplastida
Pp3c2_26540V3.1	No alias	SHV3-like 5	0.02	Archaeplastida
Pp3c2_28200V3.1	No alias	PLC-like phosphodiesterase family protein	0.1	Archaeplastida
Solyc02g014490.4.1	No alias	Glycerophosphodiester phosphodiesterase GDPDL7...	0.14	Archaeplastida
Solyc02g014530.4.1	No alias	Glycerophosphodiester phosphodiesterase GDPDL6...	0.08	Archaeplastida
Solyc07g065120.3.1	No alias	Glycerophosphodiester phosphodiesterase GDPDL4...	0.04	Archaeplastida
Zm00001e025069_P001	No alias	Glycerophosphodiester phosphodiesterase GDPDL7...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006071	glycerol metabolic process	ISS	Interproscan
BP	GO:0006928	movement of cell or subcellular component	None	Extended
MF	GO:0008081	phosphoric diester hydrolase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	ISS	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019400	alditol metabolic process	None	Extended
BP	GO:0019751	polyol metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030029	actin filament-based process	None	Extended
BP	GO:0030048	actin filament-based movement	RCA	Interproscan
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	TAS	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0048046	apoplast	IDA	Interproscan
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001558	regulation of cell growth	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0005199	structural constituent of cell wall	IEP	Neighborhood
MF	GO:0005319	lipid transporter activity	IEP	Neighborhood
MF	GO:0005548	phospholipid transporter activity	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
MF	GO:0008526	phosphatidylinositol transporter activity	IEP	Neighborhood
MF	GO:0009044	xylan 1,4-beta-xylosidase activity	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
CC	GO:0009505	plant-type cell wall	IEP	Neighborhood
BP	GO:0009664	plant-type cell wall organization	IEP	Neighborhood
BP	GO:0009827	plant-type cell wall modification	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0022604	regulation of cell morphogenesis	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0046910	pectinesterase inhibitor activity	IEP	Neighborhood
BP	GO:0051510	regulation of unidimensional cell growth	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Neighborhood
MF	GO:0097599	xylanase activity	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR030395	GP_PDE_dom	360	649

External Links

No external refs found!

AT5G58170 (SVL5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation