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Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 503.0)
Gene families : OG0031125 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0029036 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0019723 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_6511g0010 | |
| Cluster | HCCA: Cluster_399 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_37624 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 233 | 260 |
| IPR002885 | Pentatricopeptide_repeat | 508 | 532 |
| IPR002885 | Pentatricopeptide_repeat | 205 | 231 |
| IPR002885 | Pentatricopeptide_repeat | 573 | 602 |
| IPR002885 | Pentatricopeptide_repeat | 130 | 177 |
| IPR002885 | Pentatricopeptide_repeat | 332 | 379 |
| IPR002885 | Pentatricopeptide_repeat | 432 | 480 |
| No external refs found! |