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  5. MA_659042g0010

MA_659042g0010


Description : PAP6/FLN1 cofactor of plastid-encoded RNA polymerase


Gene families : OG0000505 (Archaeplastida) Phylogenetic Tree(s): OG0000505_tree ,
OG_05_0006095 (LandPlants) Phylogenetic Tree(s): OG_05_0006095_tree ,
OG_06_0009885 (SeedPlants) Phylogenetic Tree(s): OG_06_0009885_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_659042g0010
Cluster HCCA: Cluster_341

Target Alias Description ECC score Gene Family Method Actions
Gb_05959 No alias PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.05 Archaeplastida
LOC_Os01g63220.2 No alias PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.03 Archaeplastida
LOC_Os06g12600.1 No alias fructose kinase 0.03 Archaeplastida
MA_8984055g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Smo165981 No alias Carbohydrate metabolism.sucrose... 0.03 Archaeplastida
Solyc02g091490.4.1 No alias fructose kinase 0.03 Archaeplastida
Zm00001e019266_P002 No alias PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
InterPro domains Description Start Stop
IPR011611 PfkB_dom 188 505
No external refs found!