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  5. MA_6652855g0010

MA_6652855g0010


Description : no hits & (original description: none)


Gene families : OG0003163 (Archaeplastida) Phylogenetic Tree(s): OG0003163_tree ,
OG_05_0003774 (LandPlants) Phylogenetic Tree(s): OG_05_0003774_tree ,
OG_06_0004441 (SeedPlants) Phylogenetic Tree(s): OG_06_0004441_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6652855g0010
Cluster HCCA: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00238900 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.06 Archaeplastida
AT4G00450 CCT, CRP RNA polymerase II transcription mediators 0.1 Archaeplastida
Cpa|evm.model.tig00000042.125 No alias Mediator of RNA polymerase II transcription subunit 12... 0.03 Archaeplastida
GSVIVT01026933001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
Gb_27746 No alias Mediator of RNA polymerase II transcription subunit 12... 0.03 Archaeplastida
LOC_Os07g45400.1 No alias component MED12 of kinase module of MEDIATOR... 0.07 Archaeplastida
MA_10435144g0010 No alias component MED12 of kinase module of MEDIATOR... 0.13 Archaeplastida
Pp3c24_11620V3.1 No alias RNA polymerase II transcription mediators 0.06 Archaeplastida
Pp3c8_17600V3.1 No alias RNA polymerase II transcription mediators 0.08 Archaeplastida
Smo441953 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.09 Archaeplastida
Solyc01g094620.3.1 No alias component MED12 of kinase module of MEDIATOR... 0.06 Archaeplastida
Zm00001e000051_P004 No alias component MED12 of kinase module of MEDIATOR... 0.08 Archaeplastida
Zm00001e039106_P001 No alias component MED12 of kinase module of MEDIATOR... 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!