AT5G58850 (ATMYB119, MYB119)

Aliases : ATMYB119, MYB119

Description : myb domain protein 119

Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000288 (LandPlants) Phylogenetic Tree(s): OG_05_0000288_tree ,
OG_06_0000157 (SeedPlants) Phylogenetic Tree(s): OG_06_0000157_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G58850
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00256850	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AMTR_s00119p00105590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AT2G39880	AtMYB25, MYB25	myb domain protein 25	0.05	Archaeplastida
AT3G49690	MYB84, RAX3, ATMYB84	myb domain protein 84	0.04	Archaeplastida
AT5G65230	AtMYB53, MYB53	myb domain protein 53	0.05	Archaeplastida
Cpa\|evm.model.tig00020780.48	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.01	Archaeplastida
GSVIVT01016765001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.01	Archaeplastida
GSVIVT01031496001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
Gb_15814	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os01g09590.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os07g37210.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os11g10130.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os12g07610.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os12g37970.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_66255g0010	No alias	transcription factor (MYB)	0.01	Archaeplastida
MA_926162g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp1g24520.1	No alias	component SNAPC4 of SNAP snRNA transcription factor...	0.02	Archaeplastida
Pp3c10_10240V3.1	No alias	Homeodomain-like protein	0.02	Archaeplastida
Pp3c15_24080V3.1	No alias	myb domain protein 33	0.02	Archaeplastida
Pp3c9_15970V3.1	No alias	myb domain protein 43	0.01	Archaeplastida
Smo81360	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
Solyc01g094360.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc01g111500.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc06g005330.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e007337_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e014203_P004	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e018186_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e018391_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e035025_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e041535_P001	No alias	no hits & (original description: none)	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000059	obsolete protein import into nucleus, docking	IEP	Neighborhood
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0000976	transcription regulatory region sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0000987	proximal promoter sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0001067	regulatory region nucleic acid binding	IEP	Neighborhood
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0003872	6-phosphofructokinase activity	IEP	Neighborhood
MF	GO:0003886	DNA (cytosine-5-)-methyltransferase activity	IEP	Neighborhood
MF	GO:0003909	DNA ligase activity	IEP	Neighborhood
MF	GO:0003910	DNA ligase (ATP) activity	IEP	Neighborhood
MF	GO:0003983	UTP:glucose-1-phosphate uridylyltransferase activity	IEP	Neighborhood
MF	GO:0004835	tubulin-tyrosine ligase activity	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005945	6-phosphofructokinase complex	IEP	Neighborhood
BP	GO:0006011	UDP-glucose metabolic process	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006266	DNA ligation	IEP	Neighborhood
BP	GO:0006304	DNA modification	IEP	Neighborhood
BP	GO:0006305	DNA alkylation	IEP	Neighborhood
BP	GO:0006306	DNA methylation	IEP	Neighborhood
BP	GO:0006323	DNA packaging	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006342	chromatin silencing	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
CC	GO:0008278	cohesin complex	IEP	Neighborhood
MF	GO:0008378	galactosyltransferase activity	IEP	Neighborhood
MF	GO:0008443	phosphofructokinase activity	IEP	Neighborhood
BP	GO:0008608	attachment of spindle microtubules to kinetochore	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
MF	GO:0009008	DNA-methyltransferase activity	IEP	Neighborhood
BP	GO:0009566	fertilization	IEP	Neighborhood
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	Neighborhood
BP	GO:0010032	meiotic chromosome condensation	IEP	Neighborhood
MF	GO:0010314	phosphatidylinositol-5-phosphate binding	IEP	Neighborhood
BP	GO:0010424	DNA methylation on cytosine within a CG sequence	IEP	Neighborhood
MF	GO:0010428	methyl-CpNpG binding	IEP	Neighborhood
MF	GO:0010429	methyl-CpNpN binding	IEP	Neighborhood
MF	GO:0010491	UTP:arabinose-1-phosphate uridylyltransferase activity	IEP	Neighborhood
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Neighborhood
BP	GO:0016458	gene silencing	IEP	Neighborhood
BP	GO:0016569	covalent chromatin modification	IEP	Neighborhood
BP	GO:0016570	histone modification	IEP	Neighborhood
MF	GO:0016755	transferase activity, transferring amino-acyl groups	IEP	Neighborhood
MF	GO:0016756	glutathione gamma-glutamylcysteinyltransferase activity	IEP	Neighborhood
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0017103	UTP:galactose-1-phosphate uridylyltransferase activity	IEP	Neighborhood
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
BP	GO:0030261	chromosome condensation	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
BP	GO:0031047	gene silencing by RNA	IEP	Neighborhood
BP	GO:0031935	regulation of chromatin silencing	IEP	Neighborhood
BP	GO:0031937	positive regulation of chromatin silencing	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0032776	DNA methylation on cytosine	IEP	Neighborhood
BP	GO:0032879	regulation of localization	IEP	Neighborhood
BP	GO:0032880	regulation of protein localization	IEP	Neighborhood
BP	GO:0033356	UDP-L-arabinose metabolic process	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
BP	GO:0043900	regulation of multi-organism process	IEP	Neighborhood
MF	GO:0044212	transcription regulatory region DNA binding	IEP	Neighborhood
BP	GO:0044728	DNA methylation or demethylation	IEP	Neighborhood
BP	GO:0045814	negative regulation of gene expression, epigenetic	IEP	Neighborhood
BP	GO:0046398	UDP-glucuronate metabolic process	IEP	Neighborhood
BP	GO:0046937	phytochelatin metabolic process	IEP	Neighborhood
BP	GO:0046938	phytochelatin biosynthetic process	IEP	Neighborhood
MF	GO:0047268	galactinol-raffinose galactosyltransferase activity	IEP	Neighborhood
MF	GO:0047338	UTP:xylose-1-phosphate uridylyltransferase activity	IEP	Neighborhood
MF	GO:0047350	glucuronate-1-phosphate uridylyltransferase activity	IEP	Neighborhood
BP	GO:0048240	sperm capacitation	IEP	Neighborhood
BP	GO:0048444	floral organ morphogenesis	IEP	Neighborhood
BP	GO:0048449	floral organ formation	IEP	Neighborhood
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	Neighborhood
BP	GO:0048830	adventitious root development	IEP	Neighborhood
BP	GO:0051054	positive regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0051177	meiotic sister chromatid cohesion	IEP	Neighborhood
BP	GO:0051316	attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation	IEP	Neighborhood
BP	GO:0051455	attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation	IEP	Neighborhood
BP	GO:0051568	histone H3-K4 methylation	IEP	Neighborhood
MF	GO:0051748	UTP-monosaccharide-1-phosphate uridylyltransferase activity	IEP	Neighborhood
BP	GO:0051754	meiotic sister chromatid cohesion, centromeric	IEP	Neighborhood
BP	GO:0052573	UDP-D-galactose metabolic process	IEP	Neighborhood
BP	GO:0060341	regulation of cellular localization	IEP	Neighborhood
BP	GO:0060968	regulation of gene silencing	IEP	Neighborhood
MF	GO:0070569	uridylyltransferase activity	IEP	Neighborhood
BP	GO:0070601	centromeric sister chromatid cohesion	IEP	Neighborhood
BP	GO:0080154	regulation of fertilization	IEP	Neighborhood
BP	GO:0080155	regulation of double fertilization forming a zygote and endosperm	IEP	Neighborhood
BP	GO:0080188	RNA-directed DNA methylation	IEP	Neighborhood
BP	GO:0090308	regulation of methylation-dependent chromatin silencing	IEP	Neighborhood
BP	GO:0090309	positive regulation of methylation-dependent chromatin silencing	IEP	Neighborhood
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Neighborhood
BP	GO:1903827	regulation of cellular protein localization	IEP	Neighborhood
BP	GO:1905269	positive regulation of chromatin organization	IEP	Neighborhood
BP	GO:1905393	plant organ formation	IEP	Neighborhood
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Neighborhood
BP	GO:2000008	regulation of protein localization to cell surface	IEP	Neighborhood
BP	GO:2000241	regulation of reproductive process	IEP	Neighborhood
BP	GO:2001252	positive regulation of chromosome organization	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G58850 (ATMYB119, MYB119)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation