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  5. MA_681272g0010

MA_681272g0010


Description : Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana (sp|q9stf3|pp265_arath : 451.0)


Gene families : OG0003648 (Archaeplastida) Phylogenetic Tree(s): OG0003648_tree ,
OG_05_0009182 (LandPlants) Phylogenetic Tree(s): OG_05_0009182_tree ,
OG_06_0010965 (SeedPlants) Phylogenetic Tree(s): OG_06_0010965_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_681272g0010
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AT5G10690 No alias pentatricopeptide (PPR) repeat-containing protein / CBS... 0.03 Archaeplastida
Gb_12426 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
MA_113202g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 Archaeplastida
Smo52692 No alias Pentatricopeptide repeat-containing protein At5g10690... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 155 200
IPR002885 Pentatricopeptide_repeat 254 300
IPR002885 Pentatricopeptide_repeat 355 402
IPR032867 DYW_dom 529 578
IPR002885 Pentatricopeptide_repeat 58 82
IPR002885 Pentatricopeptide_repeat 499 524
IPR002885 Pentatricopeptide_repeat 430 453
No external refs found!