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  5. MA_6931619g0010

MA_6931619g0010


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000216 (SeedPlants) Phylogenetic Tree(s): OG_06_0000216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6931619g0010
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00007p00056710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G49200 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G49210 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G10910 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G16720 ATL2, TL2 TOXICOS EN LEVADURA 2 0.05 Archaeplastida
AT4G35480 RHA3B RING-H2 finger A3B 0.03 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.07 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cre01.g051700 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_14775 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_14788 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_15836 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_23076 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g11460.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os01g60730.2 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g15110.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
LOC_Os02g33720.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g35347.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g35365.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g36300.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g37450.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g46100.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g46340.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g22110.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g28080.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g49550.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g39260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g40020.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os05g45060.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g45580.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g06560.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os07g34180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.02 Archaeplastida
LOC_Os09g36500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g39450.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g02220.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g42540.1 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10429091g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_10434759g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.04 Archaeplastida
MA_308999g0010 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_308999g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_759689g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_772565g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c21_17280V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g068415.1.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g112340.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g014220.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc04g074820.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc05g010175.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc11g005300.2.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e002233_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e002430_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e003126_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e003264_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e003426_P001 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e009988_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e010029_P001 No alias ubiquitin protein ligase (XERICO) 0.02 Archaeplastida
Zm00001e010787_P001 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e013412_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e014764_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e017959_P001 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e021729_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e022781_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023234_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023723_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e024702_P002 No alias NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e034469_P001 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e036267_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e036691_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e038107_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e041409_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 88 131
No external refs found!