1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G59940

AT5G59940


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0001348 (Archaeplastida) Phylogenetic Tree(s): OG0001348_tree ,
OG_05_0000867 (LandPlants) Phylogenetic Tree(s): OG_05_0000867_tree ,
OG_06_0000460 (SeedPlants) Phylogenetic Tree(s): OG_06_0000460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G59940
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT4G01910 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT4G01925 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT4G02190 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 Archaeplastida
AT4G13992 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT4G14980 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT4G16015 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT5G29624 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 Archaeplastida
AT5G37620 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT5G39471 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT5G45730 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0004351 glutamate decarboxylase activity IEP Neighborhood
MF GO:0005275 amine transmembrane transporter activity IEP Neighborhood
BP GO:0005513 detection of calcium ion IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009593 detection of chemical stimulus IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009749 response to glucose IEP Neighborhood
BP GO:0009870 defense response signaling pathway, resistance gene-dependent IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010065 primary meristem tissue development IEP Neighborhood
BP GO:0010067 procambium histogenesis IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0010359 regulation of anion channel activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
BP GO:0016128 phytosteroid metabolic process IEP Neighborhood
BP GO:0016129 phytosteroid biosynthetic process IEP Neighborhood
BP GO:0016131 brassinosteroid metabolic process IEP Neighborhood
BP GO:0016132 brassinosteroid biosynthetic process IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0022898 regulation of transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0032409 regulation of transporter activity IEP Neighborhood
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
MF GO:0035252 UDP-xylosyltransferase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042285 xylosyltransferase activity IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
BP GO:0044070 regulation of anion transport IEP Neighborhood
BP GO:0048508 embryonic meristem development IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051592 response to calcium ion IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1903959 regulation of anion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004146 DC1 368 417
IPR004146 DC1 533 579
IPR004146 DC1 174 222
IPR004146 DC1 65 108
IPR004146 DC1 122 165
No external refs found!