Description : F-box family protein
Gene families : OG0000466 (Archaeplastida) Phylogenetic Tree(s): OG0000466_tree ,
OG_05_0000239 (LandPlants) Phylogenetic Tree(s): OG_05_0000239_tree ,
OG_06_0000111 (SeedPlants) Phylogenetic Tree(s): OG_06_0000111_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G62510 | |
Cluster | HCCA: Cluster_57 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G33010 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida | |
AT1G53790 | No alias | F-box and associated interaction domains-containing protein | 0.04 | Archaeplastida | |
AT1G60370 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | ND | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | IEP | Neighborhood |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
MF | GO:0003727 | single-stranded RNA binding | IEP | Neighborhood |
MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
MF | GO:0005372 | water transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
BP | GO:0006342 | chromatin silencing | IEP | Neighborhood |
BP | GO:0006413 | translational initiation | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0008143 | poly(A) binding | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0008474 | palmitoyl-(protein) hydrolase activity | IEP | Neighborhood |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
MF | GO:0015204 | urea transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015250 | water channel activity | IEP | Neighborhood |
BP | GO:0015840 | urea transport | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
BP | GO:0016458 | gene silencing | IEP | Neighborhood |
MF | GO:0016790 | thiolester hydrolase activity | IEP | Neighborhood |
BP | GO:0019755 | one-carbon compound transport | IEP | Neighborhood |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
BP | GO:0022412 | cellular process involved in reproduction in multicellular organism | IEP | Neighborhood |
BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
BP | GO:0031048 | chromatin silencing by small RNA | IEP | Neighborhood |
BP | GO:0040029 | regulation of gene expression, epigenetic | IEP | Neighborhood |
CC | GO:0042995 | cell projection | IEP | Neighborhood |
BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
BP | GO:0048235 | pollen sperm cell differentiation | IEP | Neighborhood |
BP | GO:0051865 | protein autoubiquitination | IEP | Neighborhood |
MF | GO:0070717 | poly-purine tract binding | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
CC | GO:0090406 | pollen tube | IEP | Neighborhood |
MF | GO:0098599 | palmitoyl hydrolase activity | IEP | Neighborhood |
CC | GO:0120025 | plasma membrane bounded cell projection | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
BP | GO:1903046 | meiotic cell cycle process | IEP | Neighborhood |
No external refs found! |