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Description : F-box associated ubiquitination effector family protein
Gene families : OG0000467 (Archaeplastida) Phylogenetic Tree(s): OG0000467_tree ,
OG_05_0000234 (LandPlants) Phylogenetic Tree(s): OG_05_0000234_tree ,
OG_06_0000102 (SeedPlants) Phylogenetic Tree(s): OG_06_0000102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G62830 | |
| Cluster | HCCA: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G11620 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida | |
| AT1G11810 | No alias | F-box associated ubiquitination effector family protein | 0.02 | Archaeplastida | |
| AT1G27490 | No alias | F-box and associated interaction domains-containing protein | 0.06 | Archaeplastida | |
| AT1G54550 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida | |
| AT1G62270 | No alias | F-box and associated interaction domains-containing protein | 0.05 | Archaeplastida | |
| AT1G65990 | No alias | type 2 peroxiredoxin-related / thiol specific... | 0.05 | Archaeplastida | |
| AT1G66490 | No alias | F-box and associated interaction domains-containing protein | 0.04 | Archaeplastida | |
| AT1G67450 | No alias | F-box and associated interaction domains-containing protein | 0.02 | Archaeplastida | |
| AT1G67455 | No alias | F-box and associated interaction domains-containing protein | 0.07 | Archaeplastida | |
| AT2G38590 | No alias | F-box and associated interaction domains-containing protein | 0.04 | Archaeplastida | |
| AT2G39355 | No alias | No description available | 0.06 | Archaeplastida | |
| AT3G04250 | No alias | F-box associated ubiquitination effector family protein | 0.06 | Archaeplastida | |
| AT3G08750 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida | |
| AT3G10430 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida | |
| AT3G13680 | No alias | F-box and associated interaction domains-containing protein | 0.09 | Archaeplastida | |
| AT3G13830 | No alias | F-box and associated interaction domains-containing protein | 0.02 | Archaeplastida | |
| AT3G17480 | No alias | F-box and associated interaction domains-containing protein | 0.05 | Archaeplastida | |
| AT3G17500 | No alias | F-box family protein | 0.03 | Archaeplastida | |
| AT3G17530 | No alias | F-box and associated interaction domains-containing protein | 0.05 | Archaeplastida | |
| AT3G18330 | No alias | F-box family protein | 0.02 | Archaeplastida | |
| AT3G19560 | No alias | F-box family protein | 0.04 | Archaeplastida | |
| AT3G19880 | No alias | F-box and associated interaction domains-containing protein | 0.05 | Archaeplastida | |
| AT3G20030 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida | |
| AT3G20690 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida | |
| AT3G21120 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida | |
| AT3G21165 | No alias | No description available | 0.04 | Archaeplastida | |
| AT3G22350 | No alias | F-box and associated interaction domains-containing protein | 0.04 | Archaeplastida | |
| AT3G22421 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida | |
| AT3G22700 | No alias | F-box and associated interaction domains-containing protein | 0.05 | Archaeplastida | |
| AT3G22770 | No alias | F-box associated ubiquitination effector family protein | 0.05 | Archaeplastida | |
| AT3G22870 | No alias | F-box and associated interaction domains-containing protein | 0.05 | Archaeplastida | |
| AT3G44120 | No alias | F-box and associated interaction domains-containing protein | 0.05 | Archaeplastida | |
| AT4G10190 | No alias | F-box and associated interaction domains-containing protein | 0.04 | Archaeplastida | |
| AT4G10740 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida | |
| AT4G17200 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida | |
| AT5G36200 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida | |
| AT5G36730 | No alias | F-box and associated interaction domains-containing protein | 0.04 | Archaeplastida | |
| AT5G36820 | No alias | F-box and associated interaction domains-containing protein | 0.04 | Archaeplastida | |
| AT5G41500 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida | |
| AT5G41510 | No alias | F-box and associated interaction domains-containing protein | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| BP | GO:0006863 | purine nucleobase transport | RCA | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
| CC | GO:0005673 | transcription factor TFIIE complex | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0007059 | chromosome segregation | IEP | Neighborhood |
| BP | GO:0007062 | sister chromatid cohesion | IEP | Neighborhood |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
| CC | GO:0009524 | phragmoplast | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010216 | maintenance of DNA methylation | IEP | Neighborhood |
| BP | GO:0010219 | regulation of vernalization response | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0040034 | regulation of development, heterochronic | IEP | Neighborhood |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
| BP | GO:0045132 | meiotic chromosome segregation | IEP | Neighborhood |
| BP | GO:0045892 | negative regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0048440 | carpel development | IEP | Neighborhood |
| BP | GO:0048441 | petal development | IEP | Neighborhood |
| BP | GO:0048442 | sepal development | IEP | Neighborhood |
| BP | GO:0048506 | regulation of timing of meristematic phase transition | IEP | Neighborhood |
| BP | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | IEP | Neighborhood |
| BP | GO:0048832 | specification of plant organ number | IEP | Neighborhood |
| BP | GO:0048833 | specification of floral organ number | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
| BP | GO:0098813 | nuclear chromosome segregation | IEP | Neighborhood |
| BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:1903046 | meiotic cell cycle process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006527 | F-box-assoc_dom_typ1 | 32 | 184 |
| No external refs found! |