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  5. AT5G62930

AT5G62930


Description : SGNH hydrolase-type esterase superfamily protein


Gene families : OG0000813 (Archaeplastida) Phylogenetic Tree(s): OG0000813_tree ,
OG_05_0001795 (LandPlants) Phylogenetic Tree(s): OG_05_0001795_tree ,
OG_06_0001728 (SeedPlants) Phylogenetic Tree(s): OG_06_0001728_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G62930
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007732001 No alias GDSL esterase/lipase At5g62930 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_3400914g0010 No alias GDSL esterase/lipase At5g62930 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp5g23570.1 No alias GDSL esterase/lipase At5g62930 OS=Arabidopsis thaliana... 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000785 chromatin IEP Neighborhood
CC GO:0000790 nuclear chromatin IEP Neighborhood
CC GO:0000792 heterochromatin IEP Neighborhood
BP GO:0001558 regulation of cell growth IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
CC GO:0005720 nuclear heterochromatin IEP Neighborhood
CC GO:0005731 nucleolus organizer region IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008327 methyl-CpG binding IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009853 photorespiration IEP Neighborhood
BP GO:0010048 vernalization response IEP Neighborhood
CC GO:0010369 chromocenter IEP Neighborhood
CC GO:0010370 perinucleolar chromocenter IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0030308 negative regulation of cell growth IEP Neighborhood
CC GO:0030874 nucleolar chromatin IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0043621 protein self-association IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044452 nucleolar part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
BP GO:0045926 negative regulation of growth IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
MF GO:0050897 cobalt ion binding IEP Neighborhood
BP GO:0080129 proteasome core complex assembly IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001087 GDSL 5 202
No external refs found!