AT5G63020

Description : Disease resistance protein (CC-NBS-LRR class) family

Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G63020
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00252340	evm_27.TU.AmTr_v1...	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00019p00088510	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00071p00163290	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g27220...	0.03	Archaeplastida
AMTR_s00071p00163330	evm_27.TU.AmTr_v1...	Probable disease resistance protein At5g63020...	0.02	Archaeplastida
AMTR_s00078p00177570	evm_27.TU.AmTr_v1...	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00078p00183570	evm_27.TU.AmTr_v1...	Probable disease resistance protein At1g61310...	0.03	Archaeplastida
AMTR_s00099p00016360	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
AMTR_s00101p00133980	evm_27.TU.AmTr_v1...	Disease resistance protein RFL1 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00104p00152930	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00121p00125720	evm_27.TU.AmTr_v1...	Probable disease resistance protein At1g61180...	0.03	Archaeplastida
AMTR_s00142p00041790	evm_27.TU.AmTr_v1...	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT1G12210	RFL1	RPS5-like 1	0.04	Archaeplastida
AT1G12280	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.04	Archaeplastida
AT1G61180	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.02	Archaeplastida
AT1G61300	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Archaeplastida
AT1G61310	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.04	Archaeplastida
AT4G26090	RPS2	NB-ARC domain-containing disease resistance protein	0.04	Archaeplastida
AT5G47250	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Archaeplastida
AT5G47260	No alias	ATP binding;GTP binding;nucleotide...	0.04	Archaeplastida
GSVIVT01014595001	No alias	Disease resistance protein At4g27190 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01038404001	No alias	Probable disease resistance protein At1g12290...	0.02	Archaeplastida
Gb_01077	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Gb_12853	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10436071g0020	No alias	Probable disease resistance protein At4g27220...	0.02	Archaeplastida
MA_259960g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_391551g0020	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_7954986g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_834155g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc08g007250.3.1	No alias	Disease resistance protein At4g27190 OS=Arabidopsis...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006497	protein lipidation	None	Extended
BP	GO:0006498	N-terminal protein lipidation	None	Extended
BP	GO:0006499	N-terminal protein myristoylation	IDA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018377	protein myristoylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031365	N-terminal protein amino acid modification	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043543	protein acylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
BP	GO:0002376	immune system process	IEP	Neighborhood
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	Neighborhood
MF	GO:0003984	acetolactate synthase activity	IEP	Neighborhood
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Neighborhood
MF	GO:0004331	fructose-2,6-bisphosphate 2-phosphatase activity	IEP	Neighborhood
MF	GO:0004737	pyruvate decarboxylase activity	IEP	Neighborhood
MF	GO:0004760	serine-pyruvate transaminase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005777	peroxisome	IEP	Neighborhood
CC	GO:0005782	peroxisomal matrix	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
BP	GO:0006000	fructose metabolic process	IEP	Neighborhood
BP	GO:0006002	fructose 6-phosphate metabolic process	IEP	Neighborhood
BP	GO:0006003	fructose 2,6-bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	IEP	Neighborhood
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006825	copper ion transport	IEP	Neighborhood
BP	GO:0006833	water transport	IEP	Neighborhood
BP	GO:0006857	oligopeptide transport	IEP	Neighborhood
BP	GO:0006873	cellular ion homeostasis	IEP	Neighborhood
BP	GO:0006955	immune response	IEP	Neighborhood
BP	GO:0007623	circadian rhythm	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008219	cell death	IEP	Neighborhood
MF	GO:0008453	alanine-glyoxylate transaminase activity	IEP	Neighborhood
BP	GO:0008654	phospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Neighborhood
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009314	response to radiation	IEP	Neighborhood
BP	GO:0009416	response to light stimulus	IEP	Neighborhood
CC	GO:0009507	chloroplast	IEP	Neighborhood
CC	GO:0009526	plastid envelope	IEP	Neighborhood
CC	GO:0009532	plastid stroma	IEP	Neighborhood
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Neighborhood
CC	GO:0009536	plastid	IEP	Neighborhood
CC	GO:0009570	chloroplast stroma	IEP	Neighborhood
BP	GO:0009582	detection of abiotic stimulus	IEP	Neighborhood
BP	GO:0009583	detection of light stimulus	IEP	Neighborhood
BP	GO:0009626	plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0009637	response to blue light	IEP	Neighborhood
BP	GO:0009638	phototropism	IEP	Neighborhood
BP	GO:0009657	plastid organization	IEP	Neighborhood
BP	GO:0009658	chloroplast organization	IEP	Neighborhood
BP	GO:0009668	plastid membrane organization	IEP	Neighborhood
BP	GO:0009785	blue light signaling pathway	IEP	Neighborhood
BP	GO:0009814	defense response, incompatible interaction	IEP	Neighborhood
BP	GO:0009870	defense response signaling pathway, resistance gene-dependent	IEP	Neighborhood
MF	GO:0009881	photoreceptor activity	IEP	Neighborhood
MF	GO:0009882	blue light photoreceptor activity	IEP	Neighborhood
BP	GO:0009902	chloroplast relocation	IEP	Neighborhood
CC	GO:0009941	chloroplast envelope	IEP	Neighborhood
BP	GO:0010027	thylakoid membrane organization	IEP	Neighborhood
BP	GO:0010075	regulation of meristem growth	IEP	Neighborhood
BP	GO:0010148	transpiration	IEP	Neighborhood
BP	GO:0010155	regulation of proton transport	IEP	Neighborhood
BP	GO:0010190	cytochrome b6f complex assembly	IEP	Neighborhood
BP	GO:0010322	regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Neighborhood
BP	GO:0010343	singlet oxygen-mediated programmed cell death	IEP	Neighborhood
BP	GO:0010380	regulation of chlorophyll biosynthetic process	IEP	Neighborhood
BP	GO:0010617	circadian regulation of calcium ion oscillation	IEP	Neighborhood
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0012501	programmed cell death	IEP	Neighborhood
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015421	oligopeptide-transporting ATPase activity	IEP	Neighborhood
MF	GO:0015440	peptide-transporting ATPase activity	IEP	Neighborhood
BP	GO:0015994	chlorophyll metabolic process	IEP	Neighborhood
BP	GO:0015996	chlorophyll catabolic process	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
BP	GO:0016485	protein processing	IEP	Neighborhood
BP	GO:0016560	protein import into peroxisome matrix, docking	IEP	Neighborhood
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Neighborhood
MF	GO:0016688	L-ascorbate peroxidase activity	IEP	Neighborhood
MF	GO:0016744	transferase activity, transferring aldehyde or ketonic groups	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
BP	GO:0017001	antibiotic catabolic process	IEP	Neighborhood
BP	GO:0017004	cytochrome complex assembly	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0019750	chloroplast localization	IEP	Neighborhood
MF	GO:0019902	phosphatase binding	IEP	Neighborhood
MF	GO:0019903	protein phosphatase binding	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030003	cellular cation homeostasis	IEP	Neighborhood
BP	GO:0030522	intracellular receptor signaling pathway	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
CC	GO:0031897	Tic complex	IEP	Neighborhood
CC	GO:0031907	microbody lumen	IEP	Neighborhood
CC	GO:0031967	organelle envelope	IEP	Neighborhood
CC	GO:0031975	envelope	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0032879	regulation of localization	IEP	Neighborhood
BP	GO:0033015	tetrapyrrole catabolic process	IEP	Neighborhood
MF	GO:0033220	amide-transporting ATPase activity	IEP	Neighborhood
BP	GO:0034050	host programmed cell death induced by symbiont	IEP	Neighborhood
CC	GO:0034357	photosynthetic membrane	IEP	Neighborhood
BP	GO:0034762	regulation of transmembrane transport	IEP	Neighborhood
BP	GO:0034765	regulation of ion transmembrane transport	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
BP	GO:0035672	oligopeptide transmembrane transport	IEP	Neighborhood
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036473	cell death in response to oxidative stress	IEP	Neighborhood
MF	GO:0038023	signaling receptor activity	IEP	Neighborhood
BP	GO:0042044	fluid transport	IEP	Neighborhood
BP	GO:0042440	pigment metabolic process	IEP	Neighborhood
CC	GO:0042579	microbody	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
MF	GO:0042623	ATPase activity, coupled	IEP	Neighborhood
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Neighborhood
CC	GO:0042651	thylakoid membrane	IEP	Neighborhood
BP	GO:0042737	drug catabolic process	IEP	Neighborhood
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	Neighborhood
BP	GO:0042744	hydrogen peroxide catabolic process	IEP	Neighborhood
BP	GO:0042793	plastid transcription	IEP	Neighborhood
MF	GO:0042887	amide transmembrane transporter activity	IEP	Neighborhood
BP	GO:0043269	regulation of ion transport	IEP	Neighborhood
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Neighborhood
BP	GO:0043609	regulation of carbon utilization	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044434	chloroplast part	IEP	Neighborhood
CC	GO:0044435	plastid part	IEP	Neighborhood
CC	GO:0044436	thylakoid part	IEP	Neighborhood
CC	GO:0044438	microbody part	IEP	Neighborhood
CC	GO:0044439	peroxisomal part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
BP	GO:0045036	protein targeting to chloroplast	IEP	Neighborhood
BP	GO:0045037	protein import into chloroplast stroma	IEP	Neighborhood
BP	GO:0045038	protein import into chloroplast thylakoid membrane	IEP	Neighborhood
BP	GO:0045087	innate immune response	IEP	Neighborhood
BP	GO:0046149	pigment catabolic process	IEP	Neighborhood
BP	GO:0046777	protein autophosphorylation	IEP	Neighborhood
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	Neighborhood
BP	GO:0048511	rhythmic process	IEP	Neighborhood
BP	GO:0048878	chemical homeostasis	IEP	Neighborhood
MF	GO:0050281	serine-glyoxylate transaminase activity	IEP	Neighborhood
MF	GO:0050308	sugar-phosphatase activity	IEP	Neighborhood
BP	GO:0050801	ion homeostasis	IEP	Neighborhood
BP	GO:0051049	regulation of transport	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051186	cofactor metabolic process	IEP	Neighborhood
BP	GO:0051187	cofactor catabolic process	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0051480	regulation of cytosolic calcium ion concentration	IEP	Neighborhood
BP	GO:0051644	plastid localization	IEP	Neighborhood
BP	GO:0051656	establishment of organelle localization	IEP	Neighborhood
BP	GO:0051667	establishment of plastid localization	IEP	Neighborhood
CC	GO:0055035	plastid thylakoid membrane	IEP	Neighborhood
BP	GO:0055080	cation homeostasis	IEP	Neighborhood
BP	GO:0055082	cellular chemical homeostasis	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
MF	GO:0060089	molecular transducer activity	IEP	Neighborhood
BP	GO:0061024	membrane organization	IEP	Neighborhood
BP	GO:0061077	chaperone-mediated protein folding	IEP	Neighborhood
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Neighborhood
BP	GO:0071071	regulation of phospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0071483	cellular response to blue light	IEP	Neighborhood
BP	GO:0071806	protein transmembrane transport	IEP	Neighborhood
BP	GO:0072596	establishment of protein localization to chloroplast	IEP	Neighborhood
BP	GO:0072598	protein localization to chloroplast	IEP	Neighborhood
BP	GO:0090056	regulation of chlorophyll metabolic process	IEP	Neighborhood
BP	GO:0090342	regulation of cell aging	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:0097468	programmed cell death in response to reactive oxygen species	IEP	Neighborhood
BP	GO:0098542	defense response to other organism	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
BP	GO:1901401	regulation of tetrapyrrole metabolic process	IEP	Neighborhood
BP	GO:1901463	regulation of tetrapyrrole biosynthetic process	IEP	Neighborhood
BP	GO:1902395	regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Neighborhood
BP	GO:1903725	regulation of phospholipid metabolic process	IEP	Neighborhood
BP	GO:1904062	regulation of cation transmembrane transport	IEP	Neighborhood
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Neighborhood
BP	GO:2000071	regulation of defense response by callose deposition	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	161	400
IPR001611	Leu-rich_rpt	533	593

External Links

No external refs found!

AT5G63020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation