Description : Pectin lyase-like superfamily protein
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00078p00106380 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.01 | Archaeplastida | |
AT1G30350 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT1G67750 | No alias | Pectate lyase family protein | 0.05 | Archaeplastida | |
AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.01 | Archaeplastida | |
AT4G13710 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
AT4G24780 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.01 | Archaeplastida | |
AT5G55720 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
GSVIVT01008053001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.01 | Archaeplastida | |
GSVIVT01011348001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.01 | Archaeplastida | |
GSVIVT01020067001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.01 | Archaeplastida | |
GSVIVT01020068001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.01 | Archaeplastida | |
LOC_Os04g05050.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
LOC_Os06g38510.2 | No alias | pectate lyase | 0.01 | Archaeplastida | |
LOC_Os10g31910.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
MA_203992g0010 | No alias | pectate lyase | 0.02 | Archaeplastida | |
MA_52869g0010 | No alias | no hits & (original description: none) | 0.17 | Archaeplastida | |
Pp3c10_20140V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c14_6710V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c15_19060V3.1 | No alias | Pectin lyase-like superfamily protein | 0.11 | Archaeplastida | |
Smo407495 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
Smo81909 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
Solyc02g093580.4.1 | No alias | pectate lyase | 0.01 | Archaeplastida | |
Solyc03g113150.3.1 | No alias | pectate lyase | 0.08 | Archaeplastida | |
Zm00001e004654_P002 | No alias | pectate lyase | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005576 | extracellular region | ISM | Interproscan |
MF | GO:0016829 | lyase activity | ISS | Interproscan |
MF | GO:0030570 | pectate lyase activity | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000902 | cell morphogenesis | IEP | Neighborhood |
BP | GO:0000904 | cell morphogenesis involved in differentiation | IEP | Neighborhood |
BP | GO:0006833 | water transport | IEP | Neighborhood |
BP | GO:0007015 | actin filament organization | IEP | Neighborhood |
BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | Neighborhood |
BP | GO:0009743 | response to carbohydrate | IEP | Neighborhood |
BP | GO:0009746 | response to hexose | IEP | Neighborhood |
BP | GO:0009750 | response to fructose | IEP | Neighborhood |
BP | GO:0010090 | trichome morphogenesis | IEP | Neighborhood |
BP | GO:0010638 | positive regulation of organelle organization | IEP | Neighborhood |
BP | GO:0030832 | regulation of actin filament length | IEP | Neighborhood |
BP | GO:0030833 | regulation of actin filament polymerization | IEP | Neighborhood |
BP | GO:0030838 | positive regulation of actin filament polymerization | IEP | Neighborhood |
BP | GO:0031334 | positive regulation of protein complex assembly | IEP | Neighborhood |
BP | GO:0032271 | regulation of protein polymerization | IEP | Neighborhood |
BP | GO:0032273 | positive regulation of protein polymerization | IEP | Neighborhood |
BP | GO:0032535 | regulation of cellular component size | IEP | Neighborhood |
BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | Neighborhood |
BP | GO:0032970 | regulation of actin filament-based process | IEP | Neighborhood |
BP | GO:0032989 | cellular component morphogenesis | IEP | Neighborhood |
BP | GO:0033043 | regulation of organelle organization | IEP | Neighborhood |
BP | GO:0034284 | response to monosaccharide | IEP | Neighborhood |
BP | GO:0042044 | fluid transport | IEP | Neighborhood |
BP | GO:0043254 | regulation of protein complex assembly | IEP | Neighborhood |
BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Neighborhood |
BP | GO:0044089 | positive regulation of cellular component biogenesis | IEP | Neighborhood |
BP | GO:0045010 | actin nucleation | IEP | Neighborhood |
CC | GO:0048046 | apoplast | IEP | Neighborhood |
BP | GO:0051128 | regulation of cellular component organization | IEP | Neighborhood |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | Neighborhood |
BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Neighborhood |
BP | GO:0051495 | positive regulation of cytoskeleton organization | IEP | Neighborhood |
BP | GO:0090066 | regulation of anatomical structure size | IEP | Neighborhood |
BP | GO:0097435 | supramolecular fiber organization | IEP | Neighborhood |
BP | GO:0110053 | regulation of actin filament organization | IEP | Neighborhood |
BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | Neighborhood |
BP | GO:1902905 | positive regulation of supramolecular fiber organization | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002022 | Pec_lyase | 190 | 347 |
No external refs found! |