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  5. MA_78644g0010

MA_78644g0010


Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum (sp|q6rvv4|tic32_pea : 264.0)


Gene families : OG0000289 (Archaeplastida) Phylogenetic Tree(s): OG0000289_tree ,
OG_05_0003402 (LandPlants) Phylogenetic Tree(s): OG_05_0003402_tree ,
OG_06_0002426 (SeedPlants) Phylogenetic Tree(s): OG_06_0002426_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_78644g0010
Cluster HCCA: Cluster_545

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00082650 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida
AMTR_s00085p00054430 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 Archaeplastida
GSVIVT01007686001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.02 Archaeplastida
GSVIVT01028900001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.05 Archaeplastida
LOC_Os06g03830.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida
Pp3c4_6480V3.1 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Archaeplastida
Zm00001e016903_P001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002347 SDR_fam 36 176
No external refs found!