MA_78902g0010


Description : component TIR1/AFB of auxin receptor complex


Gene families : OG0000271 (Archaeplastida) Phylogenetic Tree(s): OG0000271_tree ,
OG_05_0016320 (LandPlants) Phylogenetic Tree(s): OG_05_0016320_tree ,
OG_06_0015977 (SeedPlants) Phylogenetic Tree(s): OG_06_0015977_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_78902g0010
Cluster HCCA: Cluster_480

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00126140 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G12820 AFB3 auxin signaling F-box 3 0.04 Archaeplastida
AT3G26810 AFB2 auxin signaling F-box 2 0.04 Archaeplastida
AT5G49980 AFB5 auxin F-box protein 5 0.05 Archaeplastida
GSVIVT01009126001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_04515 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_04516 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
Gb_07237 No alias Coronatine-insensitive protein homolog 1b OS=Oryza... 0.04 Archaeplastida
Gb_30742 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.02 Archaeplastida
Gb_35123 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
LOC_Os05g37690.1 No alias component COI of jasmonic acid receptor complex 0.03 Archaeplastida
MA_263909g0010 No alias Coronatine-insensitive protein homolog 1b OS=Oryza... 0.03 Archaeplastida
MA_27909g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_646265g0010 No alias Coronatine-insensitive protein homolog 1a OS=Oryza... 0.03 Archaeplastida
Mp2g26590.1 No alias component COI of jasmonic acid receptor complex 0.04 Archaeplastida
Mp6g02750.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.04 Archaeplastida
Pp3c23_18960V3.1 No alias RNI-like superfamily protein 0.02 Archaeplastida
Smo168175 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc05g052620.4.1 No alias No annotation 0.03 Archaeplastida
Zm00001e008324_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 Archaeplastida
Zm00001e015908_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
Zm00001e027505_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.04 Archaeplastida
Zm00001e040776_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!