AT5G65880


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG0010414 (Archaeplastida) Phylogenetic Tree(s): OG0010414_tree ,
OG_05_0010787 (LandPlants) Phylogenetic Tree(s): OG_05_0010787_tree ,
OG_06_0012210 (SeedPlants) Phylogenetic Tree(s): OG_06_0012210_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G65880
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g47240.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g092130.2.1 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
CC GO:0005680 anaphase-promoting complex IEP Neighborhood
BP GO:0009640 photomorphogenesis IEP Neighborhood
BP GO:0009735 response to cytokinin IEP Neighborhood
BP GO:0009756 carbohydrate mediated signaling IEP Neighborhood
BP GO:0009845 seed germination IEP Neighborhood
BP GO:0009933 meristem structural organization IEP Neighborhood
BP GO:0010162 seed dormancy process IEP Neighborhood
BP GO:0010182 sugar mediated signaling pathway IEP Neighborhood
BP GO:0010229 inflorescence development IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0022611 dormancy process IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048532 anatomical structure arrangement IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0048609 multicellular organismal reproductive process IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0050826 response to freezing IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0090567 reproductive shoot system development IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!