AT1G27380 (RIC2)

Aliases : RIC2

Description : ROP-interactive CRIB motif-containing protein 2

Gene families : OG0001059 (Archaeplastida) Phylogenetic Tree(s): OG0001059_tree ,
OG_05_0000659 (LandPlants) Phylogenetic Tree(s): OG_05_0000659_tree ,
OG_06_0000439 (SeedPlants) Phylogenetic Tree(s): OG_06_0000439_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G27380

Target	Alias	Description	ECC score	Gene Family Method
AT2G33460	RIC1	ROP-interactive CRIB motif-containing protein 1	0.04	Archaeplastida
AT4G21745	No alias	PAK-box/P21-Rho-binding family protein	0.03	Archaeplastida
GSVIVT01019115001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.06	Archaeplastida
Gb_05134	No alias	GTPase effector (RIC)	0.03	Archaeplastida
LOC_Os02g06660.1	No alias	GTPase effector (RIC)	0.08	Archaeplastida
LOC_Os03g63060.1	No alias	GTPase effector (RIC)	0.04	Archaeplastida
LOC_Os04g53580.1	No alias	GTPase effector (RIC)	0.07	Archaeplastida
LOC_Os06g46754.1	No alias	GTPase effector (RIC)	0.04	Archaeplastida
LOC_Os07g26480.2	No alias	GTPase effector (RIC)	0.03	Archaeplastida
LOC_Os11g28310.1	No alias	GTPase effector (RIC)	0.03	Archaeplastida
MA_698612g0010	No alias	GTPase effector (RIC)	0.04	Archaeplastida
Zm00001e009549_P001	No alias	GTPase effector (RIC)	0.04	Archaeplastida
Zm00001e013704_P001	No alias	no hits & (original description: none)	0.07	Archaeplastida
Zm00001e021470_P001	No alias	GTPase effector (RIC)	0.05	Archaeplastida
Zm00001e033401_P001	No alias	GTPase effector (RIC)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009860	pollen tube growth	IMP	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010413	glucuronoxylan metabolic process	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045492	xylan biosynthetic process	RCA	Interproscan
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IEP	Neighborhood
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003916	DNA topoisomerase activity	IEP	Neighborhood
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Neighborhood
MF	GO:0004034	aldose 1-epimerase activity	IEP	Neighborhood
MF	GO:0004103	choline kinase activity	IEP	Neighborhood
MF	GO:0004475	mannose-1-phosphate guanylyltransferase activity	IEP	Neighborhood
MF	GO:0004568	chitinase activity	IEP	Neighborhood
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005459	UDP-galactose transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005460	UDP-glucose transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005885	Arp2/3 protein complex	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006265	DNA topological change	IEP	Neighborhood
BP	GO:0006560	proline metabolic process	IEP	Neighborhood
BP	GO:0006561	proline biosynthetic process	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	IEP	Neighborhood
MF	GO:0008905	mannose-phosphate guanylyltransferase activity	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
CC	GO:0009368	endopeptidase Clp complex	IEP	Neighborhood
BP	GO:0009408	response to heat	IEP	Neighborhood
CC	GO:0009574	preprophase band	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
BP	GO:0009617	response to bacterium	IEP	Neighborhood
BP	GO:0009636	response to toxic substance	IEP	Neighborhood
BP	GO:0009644	response to high light intensity	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Neighborhood
BP	GO:0009753	response to jasmonic acid	IEP	Neighborhood
BP	GO:0009808	lignin metabolic process	IEP	Neighborhood
BP	GO:0009809	lignin biosynthetic process	IEP	Neighborhood
BP	GO:0009832	plant-type cell wall biogenesis	IEP	Neighborhood
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	Neighborhood
CC	GO:0009840	chloroplastic endopeptidase Clp complex	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009893	positive regulation of metabolic process	IEP	Neighborhood
BP	GO:0010047	fruit dehiscence	IEP	Neighborhood
BP	GO:0010087	phloem or xylem histogenesis	IEP	Neighborhood
BP	GO:0010089	xylem development	IEP	Neighborhood
BP	GO:0010115	regulation of abscisic acid biosynthetic process	IEP	Neighborhood
BP	GO:0010116	positive regulation of abscisic acid biosynthetic process	IEP	Neighborhood
BP	GO:0010193	response to ozone	IEP	Neighborhood
BP	GO:0010395	rhamnogalacturonan I metabolic process	IEP	Neighborhood
BP	GO:0010400	rhamnogalacturonan I side chain metabolic process	IEP	Neighborhood
BP	GO:0010417	glucuronoxylan biosynthetic process	IEP	Neighborhood
MF	GO:0015020	glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015692	lead ion transport	IEP	Neighborhood
BP	GO:0015718	monocarboxylic acid transport	IEP	Neighborhood
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Neighborhood
BP	GO:0015850	organic hydroxy compound transport	IEP	Neighborhood
BP	GO:0016482	cytosolic transport	IEP	Neighborhood
CC	GO:0016602	CCAAT-binding factor complex	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016759	cellulose synthase activity	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
BP	GO:0016926	protein desumoylation	IEP	Neighborhood
BP	GO:0016999	antibiotic metabolic process	IEP	Neighborhood
BP	GO:0017000	antibiotic biosynthetic process	IEP	Neighborhood
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0019748	secondary metabolic process	IEP	Neighborhood
BP	GO:0019852	L-ascorbic acid metabolic process	IEP	Neighborhood
BP	GO:0019853	L-ascorbic acid biosynthetic process	IEP	Neighborhood
BP	GO:0022403	cell cycle phase	IEP	Neighborhood
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
MF	GO:0030775	glucuronoxylan 4-O-methyltransferase activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	IEP	Neighborhood
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0031348	negative regulation of defense response	IEP	Neighborhood
MF	GO:0031490	chromatin DNA binding	IEP	Neighborhood
BP	GO:0033542	fatty acid beta-oxidation, unsaturated, even number	IEP	Neighborhood
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Neighborhood
BP	GO:0042493	response to drug	IEP	Neighborhood
BP	GO:0042542	response to hydrogen peroxide	IEP	Neighborhood
BP	GO:0042546	cell wall biogenesis	IEP	Neighborhood
BP	GO:0042742	defense response to bacterium	IEP	Neighborhood
BP	GO:0042761	very long-chain fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0043207	response to external biotic stimulus	IEP	Neighborhood
BP	GO:0043455	regulation of secondary metabolic process	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:0044848	biological phase	IEP	Neighborhood
BP	GO:0045828	positive regulation of isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0045834	positive regulation of lipid metabolic process	IEP	Neighborhood
BP	GO:0045893	positive regulation of transcription, DNA-templated	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
BP	GO:0046677	response to antibiotic	IEP	Neighborhood
BP	GO:0046864	isoprenoid transport	IEP	Neighborhood
BP	GO:0046865	terpenoid transport	IEP	Neighborhood
BP	GO:0046889	positive regulation of lipid biosynthetic process	IEP	Neighborhood
BP	GO:0048522	positive regulation of cellular process	IEP	Neighborhood
MF	GO:0050113	inositol oxygenase activity	IEP	Neighborhood
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	Neighborhood
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0051322	anaphase	IEP	Neighborhood
BP	GO:0051704	multi-organism process	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
BP	GO:0060359	response to ammonium ion	IEP	Neighborhood
BP	GO:0062013	positive regulation of small molecule metabolic process	IEP	Neighborhood
BP	GO:0070370	cellular heat acclimation	IEP	Neighborhood
MF	GO:0070568	guanylyltransferase activity	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Neighborhood
MF	GO:0080023	3R-hydroxyacyl-CoA dehydratase activity	IEP	Neighborhood
MF	GO:0080116	glucuronoxylan glucuronosyltransferase activity	IEP	Neighborhood
BP	GO:0080168	abscisic acid transport	IEP	Neighborhood
BP	GO:0098542	defense response to other organism	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:1900378	positive regulation of secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:1901141	regulation of lignin biosynthetic process	IEP	Neighborhood
BP	GO:1901428	regulation of syringal lignin biosynthetic process	IEP	Neighborhood
BP	GO:1901430	positive regulation of syringal lignin biosynthetic process	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Neighborhood
BP	GO:1902930	regulation of alcohol biosynthetic process	IEP	Neighborhood
BP	GO:1902932	positive regulation of alcohol biosynthetic process	IEP	Neighborhood
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	Neighborhood
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	Neighborhood
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000095	CRIB_dom	70	92

External Links

No external refs found!

AT1G27380 (RIC2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation