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  5. MA_865117g0010

MA_865117g0010


Description : transcription factor (RAV/NGATHA). transcription factor (AP2-RAV)


Gene families : OG0000363 (Archaeplastida) Phylogenetic Tree(s): OG0000363_tree ,
OG_05_0000191 (LandPlants) Phylogenetic Tree(s): OG_05_0000191_tree ,
OG_06_0005259 (SeedPlants) Phylogenetic Tree(s): OG_06_0005259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_865117g0010
Cluster HCCA: Cluster_444

Target Alias Description ECC score Gene Family Method Actions
AT1G13260 EDF4, RAV1 related to ABI3/VP1 1 0.02 Archaeplastida
GSVIVT01036447001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_18035 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.04 Archaeplastida
LOC_Os01g04800.1 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.04 Archaeplastida
LOC_Os11g05740.1 No alias transcription factor (RAV/NGATHA) 0.04 Archaeplastida
LOC_Os12g06080.1 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida
MA_10436315g0010 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.05 Archaeplastida
MA_10436315g0020 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida
MA_116574g0010 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.03 Archaeplastida
MA_18923g0010 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.05 Archaeplastida
MA_246350g0010 No alias transcription factor (RAV/NGATHA) 0.05 Archaeplastida
MA_3834g0010 No alias transcription factor (RAV/NGATHA) 0.06 Archaeplastida
MA_5039g0010 No alias transcription factor (RAV/NGATHA) 0.06 Archaeplastida
MA_953813g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g22250.1 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.03 Archaeplastida
Pp3c1_16700V3.1 No alias related to ABI3/VP1 1 0.02 Archaeplastida
Pp3c2_23660V3.1 No alias AP2/B3 transcription factor family protein 0.03 Archaeplastida
Solyc04g007000.2.1 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.03 Archaeplastida
Solyc08g013690.1.1 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida
Solyc08g013700.1.1 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida
Solyc09g010230.2.1 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida
Zm00001e000156_P001 No alias transcription factor (RAV/NGATHA) 0.02 Archaeplastida
Zm00001e016956_P001 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.02 Archaeplastida
Zm00001e038099_P001 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida
Zm00001e039393_P002 No alias transcription factor (RAV/NGATHA) 0.04 Archaeplastida
Zm00001e041372_P001 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 165 263
No external refs found!