AT5G66700 (ATHB53, HB53, HB-8)

Aliases : ATHB53, HB53, HB-8

Description : homeobox 53

Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0003020 (SeedPlants) Phylogenetic Tree(s): OG_06_0003020_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G66700

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00253290	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
AMTR_s00040p00235500	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AMTR_s00078p00085160	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
AT3G01220	ATHB20, HB20	homeobox protein 20	0.01	Archaeplastida
AT4G36740	ATHB40, HB40, HB-5	homeobox protein 40	0.03	Archaeplastida
GSVIVT01020033001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.01	Archaeplastida
Gb_07209	No alias	Homeobox-leucine zipper protein HAT7 OS=Arabidopsis...	0.07	Archaeplastida
LOC_Os03g07450.1	No alias	transcription factor (HD-ZIP I/II)	0.01	Archaeplastida
LOC_Os08g32080.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
LOC_Os08g32085.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
LOC_Os10g23090.1	No alias	transcription factor (HD-ZIP I/II)	0.01	Archaeplastida
LOC_Os10g26500.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
MA_10428916g0010	No alias	transcription factor (HD-ZIP I/II)	0.01	Archaeplastida
MA_19453g0050	No alias	Homeobox-leucine zipper protein HAT5 OS=Arabidopsis...	0.02	Archaeplastida
Pp3c11_23440V3.1	No alias	homeobox 1	0.02	Archaeplastida
Pp3c17_18190V3.1	No alias	homeobox protein 16	0.02	Archaeplastida
Pp3c1_36940V3.1	No alias	homeobox protein 16	0.02	Archaeplastida
Pp3c1_37070V3.1	No alias	homeobox protein 16	0.01	Archaeplastida
Pp3c6_2730V3.1	No alias	Homeobox-leucine zipper protein family	0.02	Archaeplastida
Pp3c7_2100V3.1	No alias	Homeobox-leucine zipper protein family	0.01	Archaeplastida
Pp3c8_440V3.1	No alias	homeobox 3	0.03	Archaeplastida
Smo81609	No alias	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
Solyc02g067410.2.1	No alias	transcription factor (HD-ZIP I/II)	0.01	Archaeplastida
Solyc03g082550.3.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Solyc04g074700.4.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Solyc07g062790.1.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Solyc09g008810.3.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Zm00001e002803_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e004824_P001	No alias	transcription factor (HD-ZIP I/II)	0.01	Archaeplastida
Zm00001e012829_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e038901_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048364	root development	TAS	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004871	obsolete signal transducer activity	IEP	Neighborhood
CC	GO:0005834	heterotrimeric G-protein complex	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
BP	GO:0016926	protein desumoylation	IEP	Neighborhood
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Neighborhood
CC	GO:0098797	plasma membrane protein complex	IEP	Neighborhood
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	Neighborhood
CC	GO:1905360	GTPase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	72	125

External Links

No external refs found!

AT5G66700 (ATHB53, HB53, HB-8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation