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MA_8749g0010


Description : Calcium-binding protein CML42 OS=Arabidopsis thaliana (sp|q9svg9|cml42_arath : 140.0)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0001715 (SeedPlants) Phylogenetic Tree(s): OG_06_0001715_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_8749g0010
Cluster HCCA: Cluster_724

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00122010 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML35 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G73630 No alias EF hand calcium-binding protein family 0.08 Archaeplastida
AT3G29000 No alias Calcium-binding EF-hand family protein 0.01 Archaeplastida
AT4G03290 No alias EF hand calcium-binding protein family 0.01 Archaeplastida
AT4G14640 AtCML8, CAM8 calmodulin 8 0.01 Archaeplastida
AT4G37010 CEN2 centrin 2 0.02 Archaeplastida
GSVIVT01011435001 No alias Probable calcium-binding protein CML45 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01038234001 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
Gb_28443 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_30178 No alias Calmodulin-like protein 6 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_30819 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_37768 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g59530.1 No alias Calmodulin-like protein 1 OS=Oryza sativa subsp.... 0.01 Archaeplastida
LOC_Os03g21380.2 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.01 Archaeplastida
LOC_Os11g04560.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 Archaeplastida
MA_13199g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.01 Archaeplastida
MA_269415g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_41536g0010 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
MA_641437g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g00710.1 No alias DNA repair protein (CEN2). centrin component CEN of... 0.01 Archaeplastida
Mp8g07910.1 No alias Calmodulin-like protein 7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c13_2400V3.1 No alias EF hand calcium-binding protein family 0.01 Archaeplastida
Smo233632 No alias Calmodulin-like protein 7 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.03 Archaeplastida
Solyc09g055880.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc10g081170.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.04 Archaeplastida
Zm00001e001557_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e012873_P001 No alias DNA repair protein (CEN2). centrin component CEN of... 0.02 Archaeplastida
Zm00001e019509_P001 No alias Calmodulin-like protein 1 OS=Oryza sativa subsp. indica... 0.04 Archaeplastida
Zm00001e024051_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e038252_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 42 71
IPR002048 EF_hand_dom 127 189
No external refs found!