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  5. MA_87592g0010

MA_87592g0010


Description : pectin methylesterase


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0000108 (LandPlants) Phylogenetic Tree(s): OG_05_0000108_tree ,
OG_06_0004723 (SeedPlants) Phylogenetic Tree(s): OG_06_0004723_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_87592g0010
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00056p00166920 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00123p00050980 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AT1G05310 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT2G19150 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT2G21610 ATPE11, PE11 pectinesterase 11 0.04 Archaeplastida
AT2G36700 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT2G36710 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT2G47280 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT3G17060 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01013838001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01034985001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
Gb_01459 No alias pectin methylesterase 0.02 Archaeplastida
Gb_01460 No alias pectin methylesterase 0.03 Archaeplastida
Gb_23209 No alias pectin methylesterase 0.03 Archaeplastida
Gb_32012 No alias pectin methylesterase 0.03 Archaeplastida
Gb_39595 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os04g46740.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os05g44600.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os11g45720.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g45730.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os12g37660.1 No alias pectin methylesterase 0.04 Archaeplastida
MA_181657g0020 No alias pectin methylesterase 0.04 Archaeplastida
MA_304854g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_6149868g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_6780346g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g01420.1 No alias pectin methylesterase 0.04 Archaeplastida
Mp3g01170.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp4g01190.1 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c10_18650V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c10_19460V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c10_20120V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c12_24000V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c16_19430V3.1 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
Pp3c16_6660V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c18_13190V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c19_8330V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c25_3840V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c3_30560V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c3_32350V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c3_35040V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_35240V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c5_12660V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c5_12770V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c5_12820V3.1 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
Pp3c8_1440V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c8_1680V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c8_2010V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c8_460V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Solyc01g079180.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc01g109740.3.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc07g043240.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc10g083820.2.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc12g099230.2.1 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e020795_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e029074_P001 No alias pectin methylesterase 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 65 344
No external refs found!