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  5. MA_885909g0010

MA_885909g0010


Description : Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana (sp|q9lnu6|ppr53_arath : 619.0)


Gene families : OG0030261 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0028037 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0026293 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_885909g0010
Cluster HCCA: Cluster_399

Target Alias Description ECC score Gene Family Method Actions
Gb_38364 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 116 139
IPR002885 Pentatricopeptide_repeat 226 252
IPR002885 Pentatricopeptide_repeat 155 184
IPR002885 Pentatricopeptide_repeat 500 525
IPR032867 DYW_dom 826 950
IPR002885 Pentatricopeptide_repeat 548 607
IPR002885 Pentatricopeptide_repeat 661 709
IPR002885 Pentatricopeptide_repeat 390 436
IPR002885 Pentatricopeptide_repeat 254 291
No external refs found!