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  5. MA_88831g0010

MA_88831g0010


Description : transcription factor (bHLH)


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_88831g0010
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.03 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.03 Archaeplastida
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.03 Archaeplastida
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.03 Archaeplastida
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.02 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.05 Archaeplastida
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
AT5G01305 No alias No description available 0.03 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.03 Archaeplastida
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01009479001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01018165001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.03 Archaeplastida
GSVIVT01022120001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Gb_06182 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os12g41650.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida
MA_306658g0010 No alias transcription factor (bHLH) 0.05 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.06 Archaeplastida
Mp3g17350.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c14_23520V3.1 No alias phytochrome interacting factor 3 0.05 Archaeplastida
Pp3c1_38820V3.1 No alias phytochrome interacting factor 3 0.02 Archaeplastida
Pp3c1_40040V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc06g069600.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e027758_P002 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 69 111
No external refs found!