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  5. ATCG00340

ATCG00340 (PSAB)


Aliases : PSAB

Description : Photosystem I, PsaA/PsaB protein


Gene families : OG0000489 (Archaeplastida) Phylogenetic Tree(s): OG0000489_tree ,
OG_05_0000306 (LandPlants) Phylogenetic Tree(s): OG_05_0000306_tree ,
OG_06_0001235 (SeedPlants) Phylogenetic Tree(s): OG_06_0001235_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00340
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00250910 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.14 Archaeplastida
AMTR_s00063p00185460 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.14 Archaeplastida
AMTR_s00076p00111250 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.14 Archaeplastida
AMTR_s00334p00015340 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.14 Archaeplastida
AMTR_s01196p00002960 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Morus indica 0.14 Archaeplastida
GSVIVT01009295001 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.11 Archaeplastida
GSVIVT01014968001 No alias No description available 0.06 Archaeplastida
GSVIVT01017483001 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.1 Archaeplastida
GSVIVT01017484001 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba 0.1 Archaeplastida
GSVIVT01023733001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.1 Archaeplastida
Gb_09026 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.09 Archaeplastida
Gb_09027 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.18 Archaeplastida
Gb_11361 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.19 Archaeplastida
Gb_11944 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.18 Archaeplastida
Gb_19163 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.07 Archaeplastida
Gb_20142 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.03 Archaeplastida
Gb_41658 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.03 Archaeplastida
LOC_Os01g57962.1 No alias apoprotein PsaB of PS-I complex 0.19 Archaeplastida
LOC_Os01g57964.1 No alias apoprotein PsaA of PS-I complex 0.07 Archaeplastida
LOC_Os04g16760.1 No alias apoprotein PsaA of PS-I complex 0.53 Archaeplastida
LOC_Os05g01675.1 No alias apoprotein PsaA of PS-I complex 0.54 Archaeplastida
LOC_Os10g21248.1 No alias apoprotein PsaB of PS-I complex 0.09 Archaeplastida
LOC_Os10g21250.1 No alias apoprotein PsaA of PS-I complex 0.21 Archaeplastida
LOC_Os10g38229.1 No alias apoprotein PsaA of PS-I complex 0.32 Archaeplastida
LOC_Os10g38234.1 No alias apoprotein PsaB of PS-I complex 0.46 Archaeplastida
Mp1g07160.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.11 Archaeplastida
Mp1g16220.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.11 Archaeplastida
Mp3g20630.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.11 Archaeplastida
Smo236842 No alias Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.27 Archaeplastida
Solyc00g500056.1.1 No alias apoprotein PsaB of PS-I complex 0.46 Archaeplastida
Solyc00g500057.1.1 No alias apoprotein PsaA of PS-I complex 0.46 Archaeplastida
Solyc00g500138.1.1 No alias apoprotein PsaB of PS-I complex 0.46 Archaeplastida
Solyc00g500208.1.1 No alias apoprotein PsaB of PS-I complex 0.46 Archaeplastida
Solyc00g500209.1.1 No alias apoprotein PsaA of PS-I complex 0.46 Archaeplastida
Solyc01g017230.2.1 No alias NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.01 Archaeplastida
Solyc01g017300.2.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.2 Archaeplastida
Solyc02g020960.2.1 No alias no hits & (original description: none) 0.45 Archaeplastida
Solyc02g036320.2.1 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Zea... 0.02 Archaeplastida
Solyc05g020010.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.03 Archaeplastida
Solyc06g009940.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Morus... 0.46 Archaeplastida
Solyc07g021250.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.03 Archaeplastida
Solyc10g017910.3.1 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa... 0.01 Archaeplastida
Solyc12g033000.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.02 Archaeplastida
Solyc12g035580.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.03 Archaeplastida
Zm00001e003909_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.17 Archaeplastida
Zm00001e008601_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.19 Archaeplastida
Zm00001e042034_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.19 Archaeplastida
Zm00001e042035_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e042055_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.19 Archaeplastida
Zm00001e042056_P001 No alias apoprotein PsaB of PS-I complex 0.19 Archaeplastida
Zm00001e042075_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.16 Archaeplastida
Zm00001e042076_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e042077_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.19 Archaeplastida
Zm00001e042099_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.19 Archaeplastida
Zm00001e042100_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e042101_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.16 Archaeplastida
Zm00001e042150_P001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.19 Archaeplastida
Zm00001e042151_P001 No alias apoprotein PsaB of PS-I complex 0.19 Archaeplastida
Zm00001e042164_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e042165_P001 No alias No annotation 0.09 Archaeplastida
Zm00001e042235_P001 No alias apoprotein PsaB of PS-I complex 0.19 Archaeplastida
Zm00001e042354_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.14 Archaeplastida
Zm00001e042373_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e042404_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.16 Archaeplastida
Zm00001e042440_P001 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.14 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription, elongation RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane TAS Interproscan
CC GO:0009538 photosystem I reaction center TAS Interproscan
CC GO:0009579 thylakoid IDA Interproscan
BP GO:0009768 photosynthesis, light harvesting in photosystem I TAS Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
CC GO:0010287 plastoglobule IDA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
MF GO:0016168 chlorophyll binding TAS Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP Neighborhood
CC GO:0000312 plastid small ribosomal subunit IEP Neighborhood
CC GO:0000313 organellar ribosome IEP Neighborhood
CC GO:0000314 organellar small ribosomal subunit IEP Neighborhood
CC GO:0000315 organellar large ribosomal subunit IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0003959 NADPH dehydrogenase activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005754 mitochondrial proton-transporting ATP synthase, catalytic core IEP Neighborhood
BP GO:0006119 oxidative phosphorylation IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006175 dATP biosynthetic process IEP Neighborhood
BP GO:0006176 dATP biosynthetic process from ADP IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009151 purine deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009153 purine deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009215 purine deoxyribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009216 purine deoxyribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009262 deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP Neighborhood
CC GO:0009295 nucleoid IEP Neighborhood
CC GO:0009368 endopeptidase Clp complex IEP Neighborhood
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Neighborhood
CC GO:0009512 cytochrome b6f complex IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009532 plastid stroma IEP Neighborhood
CC GO:0009533 chloroplast stromal thylakoid IEP Neighborhood
CC GO:0009539 photosystem II reaction center IEP Neighborhood
CC GO:0009544 chloroplast ATP synthase complex IEP Neighborhood
CC GO:0009547 plastid ribosome IEP Neighborhood
CC GO:0009570 chloroplast stroma IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
BP GO:0009773 photosynthetic electron transport in photosystem I IEP Neighborhood
BP GO:0009832 plant-type cell wall biogenesis IEP Neighborhood
CC GO:0009840 chloroplastic endopeptidase Clp complex IEP Neighborhood
BP GO:0009970 cellular response to sulfate starvation IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
CC GO:0010319 stromule IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015252 proton channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
CC GO:0015935 small ribosomal subunit IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Neighborhood
BP GO:0017014 protein nitrosylation IEP Neighborhood
BP GO:0018119 peptidyl-cysteine S-nitrosylation IEP Neighborhood
BP GO:0018198 peptidyl-cysteine modification IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019692 deoxyribose phosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0030095 chloroplast photosystem II IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
CC GO:0031977 thylakoid lumen IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0042776 mitochondrial ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0045157 electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity IEP Neighborhood
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEP Neighborhood
CC GO:0045259 proton-transporting ATP synthase complex IEP Neighborhood
CC GO:0045267 proton-transporting ATP synthase, catalytic core IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0046060 dATP metabolic process IEP Neighborhood
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
BP GO:0048564 photosystem I assembly IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 8 727
No external refs found!