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  5. MA_916653g0010

MA_916653g0010


Description : Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana (sp|o04492|drb1_arath : 90.9)


Gene families : OG0000434 (Archaeplastida) Phylogenetic Tree(s): OG0000434_tree ,
OG_05_0000373 (LandPlants) Phylogenetic Tree(s): OG_05_0000373_tree ,
OG_06_0002561 (SeedPlants) Phylogenetic Tree(s): OG_06_0002561_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_916653g0010
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00117700 evm_27.TU.AmTr_v1... RNA biosynthesis.siRNA biogenesis.DRB4-DRB7.1 regulator... 0.03 Archaeplastida
Gb_03872 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_03873 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_185705g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_392655g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_693782g0010 No alias component HYL1 of DCL1-HYL1 miRNA biogenesis complex 0.07 Archaeplastida
Zm00001e040435_P001 No alias Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 3 68
IPR014720 dsRBD_dom 84 145
No external refs found!