1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_92489g0010

MA_92489g0010


Description : transcription factor (SBP)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_92489g0010
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00022p00198330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00106p00142470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AT5G50570 SPL13, SPL13A Squamosa promoter-binding protein-like (SBP domain)... 0.03 Archaeplastida
AT5G50670 SPL13, SPL13B Squamosa promoter-binding protein-like (SBP domain)... 0.03 Archaeplastida
Cre02.g104700 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Cre02.g112750 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01003836001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
Gb_15605 No alias transcription factor (SBP) 0.05 Archaeplastida
LOC_Os07g32170.1 No alias transcription factor (SBP) 0.02 Archaeplastida
MA_10427464g0040 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_10434066g0020 No alias Squamosa promoter-binding-like protein 15 OS=Oryza... 0.04 Archaeplastida
Mp1g10020.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Mp1g10030.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Pp3c16_7490V3.1 No alias squamosa promoter binding protein-like 2 0.02 Archaeplastida
Solyc02g077920.4.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Solyc10g009080.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc10g018780.3.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Solyc10g078700.3.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e010443_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e041822_P001 No alias transcription factor (SBP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
InterPro domains Description Start Stop
IPR004333 SBP_dom 244 317
No external refs found!