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  5. AMTR_s00001p00104540

AMTR_s00001p00104540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.71

No description available


Gene families : OG0002981 (Archaeplastida) Phylogenetic Tree(s): OG0002981_tree ,
OG_05_0003156 (LandPlants) Phylogenetic Tree(s): OG_05_0003156_tree ,
OG_06_0003765 (SeedPlants) Phylogenetic Tree(s): OG_06_0003765_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00104540
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT2G46100 No alias Nuclear transport factor 2 (NTF2) family protein 0.04 Archaeplastida
Cpa|evm.model.tig00022075.74 No alias No description available 0.02 Archaeplastida
GSVIVT01026980001 No alias No description available 0.06 Archaeplastida
Gb_06822 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g10495.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g095000.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004827 proline-tRNA ligase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006433 prolyl-tRNA aminoacylation IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008937 ferredoxin-NAD(P) reductase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Neighborhood
MF GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR018790 DUF2358 108 217
No external refs found!