1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00001p00125420

AMTR_s00001p00125420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.98

Description : Solute transport.porins.OEP23 outer membrane porin


Gene families : OG0006727 (Archaeplastida) Phylogenetic Tree(s): OG0006727_tree ,
OG_05_0007880 (LandPlants) Phylogenetic Tree(s): OG_05_0007880_tree ,
OG_06_0007384 (SeedPlants) Phylogenetic Tree(s): OG_06_0007384_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00125420
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Pp3c1_37080V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Neighborhood
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
BP GO:0030488 tRNA methylation IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
CC GO:0034708 methyltransferase complex IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0042255 ribosome assembly IEP Neighborhood
BP GO:0042256 mature ribosome assembly IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
MF GO:0043022 ribosome binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Neighborhood
CC GO:0043527 tRNA methyltransferase complex IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0051205 protein insertion into membrane IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018960 DUF1990 32 185
No external refs found!