1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00001p00144390

AMTR_s00001p00144390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.124

No description available


Gene families : OG0000428 (Archaeplastida) Phylogenetic Tree(s): OG0000428_tree ,
OG_05_0000219 (LandPlants) Phylogenetic Tree(s): OG_05_0000219_tree ,
OG_06_0000090 (SeedPlants) Phylogenetic Tree(s): OG_06_0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00144390

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00223750 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00010p00258360 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 1 OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00018p00142890 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00019p00135050 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00025p00129710 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00026p00168780 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00029p00240240 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00039p00222250 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00044p00183280 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00048p00094230 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00054p00045760 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00108p00146750 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00118p00077190 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00137p00056870 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00168p00037870 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s02997p00006970 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!