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  5. AMTR_s00001p00144460

AMTR_s00001p00144460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.125

No description available


Gene families : OG0000428 (Archaeplastida) Phylogenetic Tree(s): OG0000428_tree ,
OG_05_0000219 (LandPlants) Phylogenetic Tree(s): OG_05_0000219_tree ,
OG_06_0000090 (SeedPlants) Phylogenetic Tree(s): OG_06_0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00144460
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00087660 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00070p00176680 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00137p00056870 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!