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Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.190
Description : Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0020667 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0020308 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0019497 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00001p00191590 | |
| Cluster | HCCA: Cluster_119 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004497 | monooxygenase activity | IEP | Neighborhood |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Neighborhood |
| MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | Neighborhood |
| MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005231 | excitatory extracellular ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005234 | extracellularly glutamate-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| BP | GO:0006766 | vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006772 | thiamine metabolic process | IEP | Neighborhood |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | Neighborhood |
| MF | GO:0008066 | glutamate receptor activity | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Neighborhood |
| CC | GO:0009523 | photosystem II | IEP | Neighborhood |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Neighborhood |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Neighborhood |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Neighborhood |
| BP | GO:0015996 | chlorophyll catabolic process | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0022824 | transmitter-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
| MF | GO:0022835 | transmitter-gated channel activity | IEP | Neighborhood |
| MF | GO:0022836 | gated channel activity | IEP | Neighborhood |
| MF | GO:0022839 | ion gated channel activity | IEP | Neighborhood |
| BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
| MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
| CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0030594 | neurotransmitter receptor activity | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
| BP | GO:0033015 | tetrapyrrole catabolic process | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0038023 | signaling receptor activity | IEP | Neighborhood |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
| CC | GO:0042597 | periplasmic space | IEP | Neighborhood |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044425 | membrane part | IEP | Neighborhood |
| BP | GO:0046149 | pigment catabolic process | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0047746 | chlorophyllase activity | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| BP | GO:0051187 | cofactor catabolic process | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| MF | GO:1901567 | fatty acid derivative binding | IEP | Neighborhood |
| MF | GO:1901681 | sulfur compound binding | IEP | Neighborhood |
| CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 50 | 77 |
| IPR002885 | Pentatricopeptide_repeat | 325 | 346 |
| IPR002885 | Pentatricopeptide_repeat | 219 | 249 |
| IPR002885 | Pentatricopeptide_repeat | 189 | 211 |
| IPR002885 | Pentatricopeptide_repeat | 252 | 299 |
| IPR002885 | Pentatricopeptide_repeat | 432 | 474 |
| IPR002885 | Pentatricopeptide_repeat | 357 | 406 |
| IPR002885 | Pentatricopeptide_repeat | 117 | 163 |
| No external refs found! |