Description : Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana (sp|q9fwa6|pp207_arath : 539.0)
Gene families : OG0003060 (Archaeplastida) Phylogenetic Tree(s): OG0003060_tree ,
OG_05_0094277 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0075332 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_956160g0010 | |
Cluster | HCCA: Cluster_308 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Gb_07754 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida | |
Gb_24825 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | Archaeplastida | |
Gb_26159 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.07 | Archaeplastida | |
Gb_32475 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.09 | Archaeplastida | |
Mp1g25580.1 | No alias | Pentatricopeptide repeat-containing protein At1g26460,... | 0.02 | Archaeplastida | |
Zm00001e010701_P001 | No alias | Pentatricopeptide repeat-containing protein At1g26460,... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 730 | 755 |
IPR002885 | Pentatricopeptide_repeat | 529 | 552 |
IPR002885 | Pentatricopeptide_repeat | 164 | 189 |
IPR002885 | Pentatricopeptide_repeat | 321 | 349 |
IPR002885 | Pentatricopeptide_repeat | 190 | 217 |
IPR002885 | Pentatricopeptide_repeat | 54 | 86 |
IPR002885 | Pentatricopeptide_repeat | 555 | 602 |
IPR002885 | Pentatricopeptide_repeat | 353 | 401 |
IPR002885 | Pentatricopeptide_repeat | 220 | 268 |
IPR002885 | Pentatricopeptide_repeat | 454 | 501 |
IPR002885 | Pentatricopeptide_repeat | 655 | 704 |
IPR002885 | Pentatricopeptide_repeat | 89 | 137 |
No external refs found! |