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  5. AMTR_s00001p00242720

AMTR_s00001p00242720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.280

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor


Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000038 (LandPlants) Phylogenetic Tree(s): OG_05_0000038_tree ,
OG_06_0000864 (SeedPlants) Phylogenetic Tree(s): OG_06_0000864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00242720
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00252470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
AMTR_s00009p00259320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00022p00094930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00044p00058960 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
AMTR_s00092p00142980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.07 Archaeplastida
AMTR_s00119p00026870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
AT1G12260 EMB2749,... NAC 007 0.02 Archaeplastida
AT1G32510 NAC011, ANAC011 NAC domain containing protein 11 0.04 Archaeplastida
AT1G52880 ANAC018, NAM,... NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT1G52890 ANAC019, NAC019 NAC domain containing protein 19 0.02 Archaeplastida
AT1G62700 VND5, ANAC026 Arabidopsis NAC domain containing protein 26 0.02 Archaeplastida
AT1G71930 ANAC030, VND7 vascular related NAC-domain protein 7 0.02 Archaeplastida
AT2G02450 ANAC034, LOV1,... NAC domain containing protein 35 0.04 Archaeplastida
AT2G17040 NAC036, anac036 NAC domain containing protein 36 0.09 Archaeplastida
AT2G43000 NAC042, anac042 NAC domain containing protein 42 0.06 Archaeplastida
AT2G46770 NST1, ANAC043, EMB2301 NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT3G04060 anac046, NAC046 NAC domain containing protein 46 0.03 Archaeplastida
AT3G04070 anac047, NAC047 NAC domain containing protein 47 0.04 Archaeplastida
AT3G12910 No alias NAC (No Apical Meristem) domain transcriptional... 0.07 Archaeplastida
AT3G12977 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT3G49530 ANAC062, NAC062, NTL6 NAC domain containing protein 62 0.05 Archaeplastida
AT4G17980 anac071, NAC071 NAC domain containing protein 71 0.03 Archaeplastida
AT4G35580 NTL9 NAC transcription factor-like 9 0.03 Archaeplastida
AT4G36160 VND2, NAC076, ANAC076 NAC domain containing protein 76 0.02 Archaeplastida
AT5G04400 NAC077, anac077 NAC domain containing protein 77 0.03 Archaeplastida
AT5G04410 anac078, NAC2 NAC domain containing protein 2 0.04 Archaeplastida
AT5G08790 anac081, ATAF2 NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT5G13180 VNI2, NAC083, ANAC083 NAC domain containing protein 83 0.03 Archaeplastida
AT5G18270 ANAC087 Arabidopsis NAC domain containing protein 87 0.04 Archaeplastida
AT5G24590 ANAC091, TIP No description available 0.07 Archaeplastida
AT5G46590 anac096, NAC096 NAC domain containing protein 96 0.03 Archaeplastida
AT5G62380 NAC101, VND6, ANAC101 NAC-domain protein 101 0.07 Archaeplastida
GSVIVT01007194001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.07 Archaeplastida
GSVIVT01008839001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01014403001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01019702001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
GSVIVT01020394001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.09 Archaeplastida
GSVIVT01020478001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01020834001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01022354001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01023921001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.1 Archaeplastida
GSVIVT01025515001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01033032001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01033374001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
Gb_04998 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_05670 No alias transcription factor (NAC) 0.05 Archaeplastida
Gb_07132 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_12202 No alias transcription factor (NAC) 0.06 Archaeplastida
Gb_12203 No alias transcription factor (NAC) 0.04 Archaeplastida
Gb_17883 No alias transcription factor (NAC) 0.04 Archaeplastida
Gb_18916 No alias transcription factor (NAC) 0.06 Archaeplastida
Gb_20015 No alias transcription factor (NAC) 0.06 Archaeplastida
Gb_20625 No alias transcription factor (NAC) 0.07 Archaeplastida
Gb_20626 No alias transcription factor (NAC) 0.05 Archaeplastida
Gb_22607 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_28016 No alias transcription factor (NAC) 0.04 Archaeplastida
Gb_37720 No alias transcription factor (NAC) 0.04 Archaeplastida
Gb_41540 No alias transcription factor (NAC) 0.06 Archaeplastida
Gb_41742 No alias transcription factor (NAC) 0.05 Archaeplastida
LOC_Os01g60020.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os01g66120.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os03g21030.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os03g56580.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os03g60080.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os06g51070.1 No alias transcription factor (NAC) 0.05 Archaeplastida
LOC_Os07g12340.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os07g37920.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os09g32260.2 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os09g38000.1 No alias transcription factor (NAC) 0.06 Archaeplastida
LOC_Os10g33760.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os10g42130.1 No alias transcription factor (NAC) 0.06 Archaeplastida
LOC_Os11g03370.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os11g08210.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os12g29330.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os12g41680.1 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_103386g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_10426365g0010 No alias transcription factor (NAC) 0.05 Archaeplastida
MA_10426704g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_10434668g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_10436448g0010 No alias transcription factor (NAC) 0.12 Archaeplastida
MA_123846g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_137415g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_183543g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_18939g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_1948g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_21732g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_23113g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_264971g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_42101g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5115g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_64687g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_80232g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_86256g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_98483g0010 No alias transcription factor (NAC) 0.1 Archaeplastida
Mp2g07720.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Mp6g02590.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Mp6g02620.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Mp6g20920.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Pp3c16_19830V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
Pp3c6_27690V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
Pp3c6_28230V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.05 Archaeplastida
Pp3c8_6080V3.1 No alias NAC domain containing protein 2 0.02 Archaeplastida
Smo147012 No alias RNA biosynthesis.transcriptional activation.NAC... 0.06 Archaeplastida
Solyc01g009860.3.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Solyc01g102740.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc04g009440.3.1 No alias transcription factor (NAC) 0.05 Archaeplastida
Solyc04g072220.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc05g021090.4.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc06g060230.3.1 No alias transcription factor (NAC) 0.05 Archaeplastida
Solyc07g045030.4.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Solyc08g006020.4.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc10g006880.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc10g055760.2.1 No alias transcription factor (NAC) 0.11 Archaeplastida
Solyc11g017470.2.1 No alias transcription factor (NAC) 0.05 Archaeplastida
Solyc12g056790.2.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e000274_P002 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e001536_P002 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e002416_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e006136_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e006914_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e007905_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e009384_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e011786_P001 No alias transcription factor (NAC) 0.06 Archaeplastida
Zm00001e014924_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e018103_P002 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e019046_P002 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e019473_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e023019_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e023635_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e024028_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e024549_P002 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e028872_P002 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e029404_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e030150_P001 No alias transcription factor (NAC) 0.06 Archaeplastida
Zm00001e031703_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e033142_P001 No alias transcription factor (NAC) 0.09 Archaeplastida
Zm00001e034913_P002 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e034914_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e035884_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e037804_P001 No alias transcription factor (NAC) 0.06 Archaeplastida
Zm00001e038267_P001 No alias transcription factor (NAC) 0.07 Archaeplastida
Zm00001e039557_P001 No alias transcription factor (NAC) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005231 excitatory extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
CC GO:0030288 outer membrane-bounded periplasmic space IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
CC GO:0042597 periplasmic space IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003441 NAC-dom 6 133
No external refs found!