AMTR_s00001p00263390 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.393

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase

Gene families : OG0001642 (Archaeplastida) Phylogenetic Tree(s): OG0001642_tree ,
OG_05_0008144 (LandPlants) Phylogenetic Tree(s): OG_05_0008144_tree ,
OG_06_0010740 (SeedPlants) Phylogenetic Tree(s): OG_06_0010740_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AMTR_s00001p00263390
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AT5G52520 OVA6, PRORS1 Class II aaRS and biotin synthetases superfamily protein 0.04 Archaeplastida
Cre09.g406200 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
LOC_Os07g07060.1 No alias proline-tRNA ligase 0.03 Archaeplastida
MA_10436163g0010 No alias proline-tRNA ligase 0.03 Archaeplastida
Solyc01g096870.4.1 No alias proline-tRNA ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0004827 proline-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
BP GO:0006433 prolyl-tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
InterPro domains Description Start Stop
IPR002314 aa-tRNA-synt_IIb 115 287
IPR004154 Anticodon-bd 358 438
IPR016061 Pro-tRNA_ligase_II_C 487 553
No external refs found!