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  5. MA_99491g0010

MA_99491g0010


Description : E3 ubiquitin ligase (PUB)


Gene families : OG0001274 (Archaeplastida) Phylogenetic Tree(s): OG0001274_tree ,
OG_05_0094362 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0075435 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_99491g0010
Cluster HCCA: Cluster_493

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00145170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_23646 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
LOC_Os12g17880.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
LOC_Os12g17900.1 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Smo165881 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR000225 Armadillo 206 237
No external refs found!