1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. ChrSy.fgenesh.mRNA.28

ChrSy.fgenesh.mRNA.28


Description : subunit beta of Cpn60 chaperonin complex. component CPN60b of CPN60 assembly chaperone complex. chaperone (Hsp60)


Gene families : OG0000342 (Archaeplastida) Phylogenetic Tree(s): OG0000342_tree ,
OG_05_0001792 (LandPlants) Phylogenetic Tree(s): OG_05_0001792_tree ,
OG_06_0001989 (SeedPlants) Phylogenetic Tree(s): OG_06_0001989_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ChrSy.fgenesh.mRNA.28
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00260480 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.04 Archaeplastida
AMTR_s00106p00119930 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.05 Archaeplastida
AT1G26230 No alias TCP-1/cpn60 chaperonin family protein 0.06 Archaeplastida
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.04 Archaeplastida
GSVIVT01010149001 No alias External stimuli response.temperature.Hsp... 0.12 Archaeplastida
GSVIVT01016859001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01031526001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
MA_13240g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_542957g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_97627g0010 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.02 Archaeplastida
Pp3c6_20400V3.1 No alias chaperonin 60 beta 0.03 Archaeplastida
Pp3c8_16290V3.1 No alias chaperonin-60alpha 0.02 Archaeplastida
Smo168153 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Solyc03g120850.4.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Solyc05g010240.4.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.09 Archaeplastida
Zm00001e001025_P002 No alias subunit beta of Cpn60 chaperonin complex. component... 0.12 Archaeplastida
Zm00001e029825_P001 No alias subunit beta of Cpn60 chaperonin complex. component... 0.04 Archaeplastida
Zm00001e031536_P001 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 475 526
IPR002423 Cpn60/TCP-1 55 469
No external refs found!